RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 CD5P06127 495 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 EIF4EP06730 217 aaKnown RBP8.61□□□□□ -1.03
YBX3-207ENST00000539204 SPP1P10451 314 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 HLA-GP17693 338 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 RANBP1P43487 201 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 PYDC2Q56P42 97 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 OR2B11Q5JQS5 317 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 UBE2NLQ5JXB2 153 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 FAM90A2PQ658T7 463 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 KCTD9Q7L273 389 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 C6orf223Q8N319 242 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 ATP6V0BQ99437 205 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 EXTL2Q9UBQ6 330 aa8.61□□□□□ -1.03
YBX3-207ENST00000539204 FAT1Q14517 4588 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 TRAV14DV4A0A0A6YYC5 116 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 CGB1A6NKQ9 187 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 FOXI3A8MTJ6 420 aaPredicted RBP8.6□□□□□ -1.03
YBX3-207ENST00000539204 YIF1AO95070 293 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 BCAP31P51572 246 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 IL18Q14116 193 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 P2RY14Q15391 338 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 SLC25A24Q6NUK1 477 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 TCF24Q7RTU0 167 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 OR5H6Q8NGV6 325 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 OR4S2Q8NH73 311 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 CLEC5AQ9NY25 188 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 C21orf62Q9NYP8 219 aa8.6□□□□□ -1.03
YBX3-207ENST00000539204 IGHV3OR16-13A0A075B7E8 117 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 IGHV3-74A0A0B4J1X5 117 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 SLC17A2O00624 439 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 GSTZ1O43708 216 aaPredicted RBP8.59□□□□□ -1.03
YBX3-207ENST00000539204 HRASP01112 189 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 FAM3BP58499 235 aaPredicted RBP8.59□□□□□ -1.03
YBX3-207ENST00000539204 OR2B8PP59922 312 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 RPL30P62888 115 aaKnown RBP8.59□□□□□ -1.03
YBX3-207ENST00000539204 TRPT1Q86TN4 253 aaKnown RBP8.59□□□□□ -1.03
YBX3-207ENST00000539204 H1FOOQ8IZA3 346 aaPredicted RBP8.59□□□□□ -1.03
YBX3-207ENST00000539204 UBAC2Q8NBM4 344 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 DUSP18Q8NEJ0 188 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 C15orf40Q8WUR7 153 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 MS4A6AQ9H2W1 248 aa8.59□□□□□ -1.03
YBX3-207ENST00000539204 IGHV3-21A0A0B4J1V1 117 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 IGLC7A0M8Q6 106 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
YBX3-207ENST00000539204 PLA2G10O15496 165 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 PFDN1O60925 122 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 SLC22A5O76082 557 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 CTSGP08311 255 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 SPART-AS1P0CW21 52 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 RPL11P62913 178 aaKnown RBP8.58□□□□□ -1.04
YBX3-207ENST00000539204 MRPS10P82664 201 aaKnown RBP8.58□□□□□ -1.04
YBX3-207ENST00000539204 RELQ04864 619 aaPredicted RBP8.58□□□□□ -1.04
YBX3-207ENST00000539204 Q56UQ5 140 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 PLAC9Q5JTB6 97 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 HES5Q5TA89 166 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 OR56B1Q8NGI3 324 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 LGALS14Q8TCE9 139 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 SCARB1Q8WTV0 552 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 CHAC2Q8WUX2 184 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 SLC25A38Q96DW6 304 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 S100A16Q96FQ6 103 aaKnown RBP8.58□□□□□ -1.04
YBX3-207ENST00000539204 OR10C1Q96KK4 312 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 SRSF8Q9BRL6 282 aaKnown RBP8.58□□□□□ -1.04
YBX3-207ENST00000539204 AIFM2Q9BRQ8 373 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 COMMD5Q9GZQ3 224 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 HRASLSQ9HDD0 168 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 RBMX2Q9Y388 322 aaKnown RBP8.58□□□□□ -1.04
YBX3-207ENST00000539204 TMED3Q9Y3Q3 217 aa8.58□□□□□ -1.04
YBX3-207ENST00000539204 hCG_2014768A0A024R1R8 64 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 NBDYA0A0U1RRE5 68 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 NUPL2O15504 423 aaKnown RBP8.57□□□□□ -1.04
YBX3-207ENST00000539204 FCGR3AP08637 254 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 C4BPBP20851 252 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 RFX2P48378 723 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 TRIQKQ629K1 86 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 MZT2BQ6NZ67 158 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 ZNF66Q6ZN08 573 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 TCTEX1D2Q8WW35 142 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 TRIM63Q969Q1 353 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 ABHD1Q96SE0 405 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 HSD17B10Q99714 261 aaKnown RBP8.57□□□□□ -1.04
YBX3-207ENST00000539204 BET1LQ9NYM9 111 aa8.57□□□□□ -1.04
YBX3-207ENST00000539204 VPS13BQ7Z7G8 4022 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 A0A0A6YYH2 397 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 TRAV2A0A0B4J234 112 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 A6NJ64 397 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 ST8SIA3O43173 380 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 SERPINE2P07093 398 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 OR13C7P0DN81 318 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 BRWD1-AS2P59051 145 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 RAB11BQ15907 218 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 NRARPQ7Z6K4 114 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 FAM24BQ8N5W8 94 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 OR10W1Q8NGF6 305 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 SMIM4Q8WVI0 70 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 DEDD2Q8WXF8 326 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 MAFIPQ8WZ33 124 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 FAM3DQ96BQ1 224 aa8.56□□□□□ -1.04
YBX3-207ENST00000539204 ZNF414Q96IQ9 312 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms