RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 CCDC88CQ9P219 2028 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 CCDC144AA2RUR9 1427 aa0.87□□□□□ -2.27
CCDC7-209ENST00000539197 SCAF11Q99590 1463 aaKnown RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 TRAV9-1A0A075B6T8 112 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 IGKV2-40A0A087WW87 121 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 hADV38S2A0JD32 116 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 BUB1B-PAK6H3BSN5 160 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 IGKV2D-40P01614 121 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 CLPSP04118 112 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 UBBP0CG47 229 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 ZNF705BP0CI00 300 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 GPX2P18283 190 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 ZNF80P51504 273 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 FXYD2P54710 66 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 MRPS15P82914 257 aaKnown RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 ZNF345Q14585 488 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 Q1T7F1 81 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 IAH1Q2TAA2 248 aaPredicted RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 ARHGAP11BQ3KRB8 267 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 TMEM97Q5BJF2 176 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 RPL22L1Q6P5R6 122 aaKnown RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 ZNF439Q8NDP4 499 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 OR8B3Q8NGG8 313 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 TERB2Q8NHR7 220 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 MCFD2Q8NI22 146 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 TMEM106AQ96A25 262 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 CHMP6Q96FZ7 201 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 SIGMAR1Q99720 223 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 CMSS1Q9BQ75 279 aaKnown RBP0.86□□□□□ -2.27
CCDC7-209ENST00000539197 TRIM4Q9C037 500 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 CST9LQ9H4G1 147 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 HECW2Q9P2P5 1572 aa0.86□□□□□ -2.27
CCDC7-209ENST00000539197 DICER1Q9UPY3 1922 aaKnown RBP0.85□□□□□ -2.27
CCDC7-209ENST00000539197 NUP155O75694 1391 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SLX4Q8IY92 1834 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SCN9AQ15858 1988 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 PIRO00625 290 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 PDE6DO43924 150 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 ZNF682O95780 498 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 PMP2P02689 132 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SHBGP04278 402 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SMIM17P0DL12 118 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SMIM10L2AP0DMW4 78 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SMIM10L2BP0DMW5 78 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 CRYGAP11844 174 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 NFYAP23511 347 aaPredicted RBP0.85□□□□□ -2.27
CCDC7-209ENST00000539197 HSD11B1P28845 292 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 HOXA6P31267 233 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 CAPZBP47756 277 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 CDC42P60953 191 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 HIST1H3AP68431 136 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 H3F3AP84243 136 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SPA17Q15506 151 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 C12orf74Q32Q52 190 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SPANXN3Q5MJ09 141 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 LCN15Q6UWW0 184 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 FP248Q71RG6 208 aaPredicted RBP0.85□□□□□ -2.27
CCDC7-209ENST00000539197 DHFR2Q86XF0 187 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 OR6V1Q8N148 313 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 C12orf45Q8N5I9 185 aaPredicted RBP0.85□□□□□ -2.27
CCDC7-209ENST00000539197 GDPD1Q8N9F7 314 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 WFDC11Q8NEX6 87 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 NAV1Q8NEY1 1877 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 OR51A2Q8NGJ7 313 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 PFN4Q8NHR9 129 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 CT55Q8WUE5 264 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 C11orf40Q8WZ69 217 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SCGB3A1Q96QR1 104 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 RETNLBQ9BQ08 111 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 GINS4Q9BRT9 223 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 C20orf27Q9GZN8 174 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 CCDC90BQ9GZT6 254 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 CYSTM1Q9H1C7 97 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 TLNRD1Q9H1K6 362 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 LHFPL6Q9Y693 200 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 TTC21AQ8NDW8 1320 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 SIPA1L1O43166 1804 aa0.85□□□□□ -2.27
CCDC7-209ENST00000539197 TONSLQ96HA7 1378 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 WDR90Q96KV7 1748 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 NOTCH1P46531 2555 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 hCG_1818297A0A087WSY0 165 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 TRBV6-5A0A0K0K1A5 114 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 A8MT66 165 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 SDCBPO00560 298 aaPredicted RBP0.84□□□□□ -2.27
CCDC7-209ENST00000539197 OR2J2O76002 312 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 SERPINA1P01009 418 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 IFNA10P01566 189 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 CRPP02741 224 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 SERPINE1P05121 402 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 IL9P15248 144 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 AKR1C3P42330 323 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 NNATQ16517 81 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 Q6ZQT0 140 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 KRT222Q8N1A0 295 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 OR52L1Q8NGH7 329 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 OR5A1Q8NGJ0 315 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 SLC25A40Q8TBP6 338 aa0.84□□□□□ -2.27
CCDC7-209ENST00000539197 IGKV1D-42A0A075B6H8 117 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 TMEM212A6NML5 194 aa0.83□□□□□ -2.28
CCDC7-209ENST00000539197 CLDN25C9JDP6 229 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms