RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 OR10D3Q8NH80 312 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF721Q8TF20 911 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 EEF1AKMT1Q8WVE0 214 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 Q9BRP9 147 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RNASE7Q9H1E1 156 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM38BQ9NVV0 291 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 GLS2Q9UI32 602 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 KLK12Q9UKR0 248 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C14orf166Q9Y224 244 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 HEY1Q9Y5J3 304 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ALG5Q9Y673 324 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ANK3Q12955 4377 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 CASKIN1Q8WXD9 1431 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 MYO9BQ13459 2157 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 DOCK4Q8N1I0 1966 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RANBP2P49792 3224 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 LMO7Q8WWI1 1683 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 MALRD1Q5VYJ5 2156 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 PXDNQ92626 1479 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 CASP8AP2Q9UKL3 1982 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 NF1P21359 2839 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 IQGAP3Q86VI3 1631 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 IGLV3-9A0A075B6K5 115 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TGIF2-C20orf24A0A0A6YYL0 155 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TRAV8-2A0A0B4J237 113 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TRAV4A0A0B4J268 109 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 IGHV1-69-2A0A0G2JMI3 117 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR4C46A6NHA9 309 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TNFAIP8O95379 198 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR56A5P0C7T3 313 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 CPMP14384 443 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 S100A2P29034 98 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 PYCR1P32322 319 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RPS11P62280 158 aaKnown RBP eCLIP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ELOCQ15369 112 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM241Q24JQ0 296 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 KRTAP6-3Q3LI67 103 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ASB16-AS1Q495Z4 193 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 FAM78AQ5JUQ0 283 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C3orf33Q6P1S2 294 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZFP82Q8N141 532 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF567Q8N184 647 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 Q8N2B8 174 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RNF182Q8N6D2 247 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 YIPF7Q8N8F6 280 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 FER1L6-AS1Q8NA97 138 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZFP62Q8NB50 900 aaPredicted RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 OR10K1Q8NGX5 313 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ASB17Q8WXJ9 295 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RAB8BQ92930 207 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RNASE6Q93091 150 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM159Q96B96 161 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 DNAJC30Q96LL9 226 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 KLF6Q99612 283 aaPredicted RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ORC6Q9Y5N6 252 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 DLEC1Q9Y238 1755 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SPEGQ15772 3267 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 COL4A1P02462 1669 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 A0A0C4DFX4 3053 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 LOC285556D6RIA3 1793 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 M0QYV0 167 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 M0QZ92 97 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 MFNGO00587 321 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SLC22A1O15245 554 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SERPINA1P01009 418 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 P0C880 135 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 CCL5P13501 91 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 MARCKSL1P49006 195 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TAS2R43P59537 309 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 POU6F1Q14863 301 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 RIC1Q4ADV7 1423 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TMEM69Q5SWH9 247 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF678Q5SXM1 525 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C10orf91Q5T1B1 145 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TBPL2Q6SJ96 375 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SCXQ7RTU7 201 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 PHF5AQ7RTV0 110 aaKnown RBP0.55□□□□□ -2.32
HIF1A-204ENST00000539097 PRR15Q8IV56 129 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 TBC1D19Q8N5T2 526 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZFAND2AQ8N6M9 145 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 PACRGLQ8N7B6 248 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZDHHC22Q8N966 263 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 SLC37A2Q8TED4 501 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 C4orf3Q8WVX3 66 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ZNF382Q96SR6 550 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 GINS3Q9BRX5 216 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 MED18Q9BUE0 208 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 ARL6Q9H0F7 186 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 HS3ST2Q9Y278 367 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 UFC1Q9Y3C8 167 aa0.55□□□□□ -2.32
HIF1A-204ENST00000539097 GOLGB1Q14789 3259 aaKnown RBP0.54□□□□□ -2.32
HIF1A-204ENST00000539097 PLEKHH2Q8IVE3 1493 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 BOD1L1Q8NFC6 3051 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 TANC2Q9HCD6 1990 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 LAMA4Q16363 1823 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 A0A0D9SEW6 157 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 A0A1W2PP18 115 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 GNG14A0A1W2PPG7 69 aa0.54□□□□□ -2.32
HIF1A-204ENST00000539097 C17orf51A8MQB3 221 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms