RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 AURKAIP1Q9NWT8 199 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-207ENST00000538862 SLC25A10Q9UBX3 287 aaPredicted RBP11.88□□□□□ -0.51
CDCA3-207ENST00000538862 YTHDF2Q9Y5A9 579 aaKnown RBP11.88□□□□□ -0.51
CDCA3-207ENST00000538862 TRAPPC1Q9Y5R8 145 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 LY96Q9Y6Y9 160 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 CADP27708 2225 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 TRAV9-1A0A075B6T8 112 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 IGHV1-46P01743 117 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 AREGP15514 252 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 PAX1P15863 534 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 DDTP30046 118 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 CCKARP32238 428 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 SLC25A48Q6ZT89 311 aaKnown RBP11.88□□□□□ -0.51
CDCA3-207ENST00000538862 OR10G8Q8NGN5 311 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 OCC1Q8TAD7 63 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 UHRF2Q96PU4 802 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 ELOVL5Q9NYP7 299 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 ABCA12Q86UK0 2595 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 DCHS2Q6V1P9 2916 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 C9JCJ5 164 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 UPK2O00526 184 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 PRCDQ00LT1 54 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 RTL8BQ17RB0 113 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 TEX38Q6PEX7 206 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 RND1Q92730 232 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 PLEKHA3Q9HB20 300 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 FKBP11Q9NYL4 201 aa11.87□□□□□ -0.51
CDCA3-207ENST00000538862 RPUSD1Q9UJJ7 312 aaKnown RBP11.87□□□□□ -0.51
CDCA3-207ENST00000538862 PGPEP1LA6NFU8 196 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 FAM90A27PA6NNH2 459 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 J3QR06 171 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CIDEAO60543 219 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 LINC00614P0C842 121 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 LINC00869P0C866 280 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 IGFBP2P18065 325 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CEACAM8P31997 349 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-207ENST00000538862 RPL31P62899 125 aaKnown RBP11.86□□□□□ -0.51
CDCA3-207ENST00000538862 TMEM95Q3KNT9 176 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 SPATA31B1PQ5VZV4 182 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 DUX4L9Q6RFH8 374 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-207ENST00000538862 SLC45A2Q9UMX9 530 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 A0A0G2JNJ9 132 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CT45A6P0DMU7 189 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CT45A5P0DMU8 189 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CT45A7P0DMV0 189 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 IRF2P14316 349 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 YPEL3P61236 119 aaPredicted RBP11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CFAP161Q6P656 301 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CLEC2AQ6UVW9 174 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 GBGT1Q8N5D6 347 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 DEFB108BQ8NET1 73 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 OR4P4Q8NGL7 312 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 SLC35E1Q96K37 410 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 CCL13Q99616 98 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 BET1LQ9NYM9 111 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 Q9UFV3 132 aa11.86□□□□□ -0.51
CDCA3-207ENST00000538862 RAI1Q7Z5J4 1906 aaPredicted RBP11.85□□□□□ -0.51
CDCA3-207ENST00000538862 hADV38S2A0JD32 116 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 HSBP1L1C9JCN9 74 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 CD40P25942 277 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 C2orf83Q53S99 150 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 TGIF2LXQ8IUE1 241 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 NUP37Q8NFH4 326 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 C19orf24Q9BVV8 132 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 TMEM167BQ9NRX6 74 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 SLC35D1Q9NTN3 355 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 TEX15Q9BXT5 2789 aa11.85□□□□□ -0.51
CDCA3-207ENST00000538862 A0A087X0M5 115 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 A0A1B0GX30 115 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 A8MXE2 369 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 FOXH1O75593 365 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 PNKDQ8N490 385 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 FAM216BQ8N7L0 139 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 OR5B3Q8NH48 314 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 NOL4LQ96MY1 436 aaPredicted RBP11.84□□□□□ -0.51
CDCA3-207ENST00000538862 HINT2Q9BX68 163 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 PRO1933Q9H354 126 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 IL36BQ9NZH7 164 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 LINC00312Q9Y6C7 94 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 DYSFO75923 2080 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 TEX50A0A1B0GTY4 177 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 MMP23AO75900 390 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 MYOD1P15172 320 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 G0S2P27469 103 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 CHRNB4P30926 498 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 PRSS8Q16651 343 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 OR1L8Q8NGR8 309 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 NABP2Q9BQ15 211 aa11.84□□□□□ -0.51
CDCA3-207ENST00000538862 SRRM4A7MD48 611 aaKnown RBP11.83□□□□□ -0.52
CDCA3-207ENST00000538862 MEF2CQ06413 473 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-207ENST00000538862 FAM27E3Q08E93 113 aa11.83□□□□□ -0.52
CDCA3-207ENST00000538862 GAGE1Q13065 139 aa11.83□□□□□ -0.52
CDCA3-207ENST00000538862 ZNF833PQ6ZTB9 187 aa11.83□□□□□ -0.52
CDCA3-207ENST00000538862 MIR17HGQ75NE6 70 aa11.83□□□□□ -0.52
CDCA3-207ENST00000538862 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-207ENST00000538862 EAF1Q96JC9 268 aaPredicted RBP11.83□□□□□ -0.52
CDCA3-207ENST00000538862 TECRQ9NZ01 308 aaKnown RBP11.83□□□□□ -0.52
CDCA3-207ENST00000538862 CSMD1Q96PZ7 3565 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms