RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 ABI3Q9P2A4 366 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 IL36RNQ9UBH0 155 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 TRAPPC2LQ9UL33 140 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ZNF835Q9Y2P0 537 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 ZNF257Q9Y2Q1 563 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 LOXL2Q9Y4K0 774 aa5.5□□□□□ -1.53
USP28-207ENST00000538475 DSCAML1Q8TD84 2053 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 MYO9BQ13459 2157 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 A8MWL6 223 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 SHISA9B4DS77 424 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 C2CD4DB7Z1M9 353 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 F8W1H4 67 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 RRHO14718 337 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 DUX1O43812 170 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 P04436 131 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 IGHV4-34P06331 123 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 ADH4P08319 380 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 FABP2P12104 132 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 LIFP15018 202 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 G6PCP35575 357 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 CSN1S1P47710 185 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 GPR12P47775 334 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 MFAP2P55001 183 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 ERVK11-1P61568 191 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 ERVK-16P61578 105 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 HBBP68871 147 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 KIAA1644Q3SXP7 199 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 TIMM23BQ5SRD1 257 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 FAM120AOSQ5T036 256 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 C16orf54Q6UWD8 224 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 PARM1Q6UWI2 310 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 ERASQ7Z444 233 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 GATD1Q8NB37 220 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 OR10W1Q8NGF6 305 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 BLNKQ8WV28 456 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 IL1F10Q8WWZ1 152 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 RTL8AQ9BWD3 113 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 DEFB126Q9BYW3 111 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 VCX2Q9H322 139 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 MS4A5Q9H3V2 200 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 PLEKHA3Q9HB20 300 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 RAB9BQ9NP90 201 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 HEYLQ9NQ87 328 aaPredicted RBP5.49□□□□□ -1.53
USP28-207ENST00000538475 OR1A1Q9P1Q5 309 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 HIGD1BQ9P298 99 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 DNAH12Q6ZR08 3092 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 KNL1Q8NG31 2342 aa5.49□□□□□ -1.53
USP28-207ENST00000538475 IGKV3D-15A0A087WSY6 115 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 A0A0G2JLM5 398 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 A0A1W2PPC4 97 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 A0A1W2PPM0 123 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 ZNF716A6NP11 495 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 LMO7DNF2Z398 122 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 F2RL2O00254 374 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 RBMXL2O75526 392 aaKnown RBP5.48□□□□□ -1.53
USP28-207ENST00000538475 C8orf88P0DMB2 117 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 PPIAL4GP0DN37 164 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 GFERP55789 205 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 RIPPLY3P57055 190 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 SRSF1Q07955 248 aaKnown RBP eCLIP5.48□□□□□ -1.53
USP28-207ENST00000538475 GABRA6Q16445 453 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 TMEM95Q3KNT9 176 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 MIC13Q5XKP0 118 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 CFAP161Q6P656 301 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 WDR82Q6UXN9 313 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 SHISA6Q6ZSJ9 500 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 BOD1L2Q8IYS8 172 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 ATOH7Q8N100 152 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 NUP35Q8NFH5 326 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 STXBP6Q8NFX7 210 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 SARAFQ96BY9 339 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 FER1L6-AS2Q96M78 137 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 CDX2Q99626 313 aaPredicted RBP5.48□□□□□ -1.53
USP28-207ENST00000538475 CHCHD2Q9Y6H1 151 aaPredicted RBP5.48□□□□□ -1.53
USP28-207ENST00000538475 MED12Q93074 2177 aa5.48□□□□□ -1.53
USP28-207ENST00000538475 IGHV1-24A0A0C4DH33 117 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 A0A0J9YW62 118 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 TEX50A0A1B0GTY4 177 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 A1L4Q6 167 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 C17orf98A8MV24 154 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 SAP30O75446 220 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 HLA-DRB4P13762 266 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 DUSP3P51452 185 aaPredicted RBP5.47□□□□□ -1.53
USP28-207ENST00000538475 MLF1P58340 268 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 PSG5Q15238 335 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 OR1C1Q15619 314 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 POU2AF1Q16633 256 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 CEACAM16Q2WEN9 425 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 LGALS9BQ3B8N2 356 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 ZNF542PQ5EBM4 170 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 GCSAMLQ5JQS6 135 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 LGALS9CQ6DKI2 356 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 C2orf91Q6ZV80 131 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 DOLPP1Q86YN1 238 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 UBALD2Q8IYN6 164 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 SPEM1Q8N4L4 309 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 TEX45Q8NA69 505 aa5.47□□□□□ -1.53
USP28-207ENST00000538475 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.47□□□□□ -1.53
USP28-207ENST00000538475 OR4A5Q8NH83 315 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms