RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 OR10C1Q96KK4 312 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 SLIRPQ9GZT3 109 aaKnown RBP10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 HRH4Q9H3N8 390 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 DAPK2Q9UIK4 370 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 OR51B2Q9Y5P1 312 aa10.18□□□□□ -0.78
SMARCA4-206ENST00000538456 PRSS29PA6NIE9 313 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 NOTOA8MTQ0 251 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 DNASE2O00115 360 aaPredicted RBP10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 SCGNO76038 276 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 KRASP01116 189 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 IGHV3-48P01763 117 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 RLN1P04808 185 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 RPL11P62913 178 aaKnown RBP10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 FAM24BQ8N5W8 94 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 NXF2Q9GZY0 626 aaKnown RBP10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 MS4A6AQ9H2W1 248 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 RHBDL2Q9NX52 303 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 DNAH17Q9UFH2 4485 aa10.17□□□□□ -0.78
SMARCA4-206ENST00000538456 DYNC1H1Q14204 4646 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 TRAV10A0A0B4J240 114 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 IGHV3-66A0A0C4DH42 116 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 M0R2N4 97 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 ST8SIA3O43173 380 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 EIF4EP06730 217 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 SDC2P34741 201 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 G6PCP35575 357 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 RPS19P39019 145 aaKnown RBP10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 TPRA1Q86W33 373 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 HOGA1Q86XE5 327 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 STHQ8IWL8 128 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 CENPSQ8N2Z9 138 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 ST8SIA2Q92186 375 aa10.16□□□□□ -0.78
SMARCA4-206ENST00000538456 TRAV18A0A075B6X5 111 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 DBX1A6NMT0 343 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 RTL8CO15255 209 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 SNAPC5O75971 98 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 DFFBO76075 338 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 APOHP02749 345 aaPredicted RBP10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 RORCP51449 518 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 MFAP4P55083 255 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 HERV-K104P61576 105 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 PVRIGQ6DKI7 326 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 LILRB2Q8N423 598 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 OR1P1Q8NH06 330 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 MCFD2Q8NI22 146 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 FCAMRQ8WWV6 532 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 TMEM56Q96MV1 263 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 RABAC1Q9UI14 185 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.78
SMARCA4-206ENST00000538456 PKD1P98161 4303 aa10.15□□□□□ -0.79
SMARCA4-206ENST00000538456 ELOA3CA0A087WX78 387 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 MEIS3P1A6NDR6 274 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 I3L2K1 104 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 GNG7O60262 68 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 GIG44P09565 113 aaPredicted RBP10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 MIFP14174 115 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 C4BPBP20851 252 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 F2RP25116 425 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 GNRHRP30968 328 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 LPAR6P43657 344 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 MXD1Q05195 221 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 ZNF767PQ75MW2 155 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 PINX1Q96BK5 328 aaKnown RBP10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 GINS3Q9BRX5 216 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 PRNDQ9UKY0 176 aa10.14□□□□□ -0.79
SMARCA4-206ENST00000538456 MT-CO2P00403 227 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 CD5P06127 495 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 CLEC2LP0C7M8 214 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 SFXN4Q6P4A7 337 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 TOMM20LQ6UXN7 152 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 CROCCP3Q8IVE0 287 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 OR5AP2Q8NGF4 316 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 AP3S1Q92572 193 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 SLC25A38Q96DW6 304 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 RNF126Q9BV68 326 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 KRTAP4-5Q9BYR2 181 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 CLEC5AQ9NY25 188 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 CELA1Q9UNI1 258 aa10.13□□□□□ -0.79
SMARCA4-206ENST00000538456 DEFB131BA0A096LNP1 70 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 PGLYRP1O75594 196 aaPredicted RBP10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 AMBPP02760 352 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 P0DMU3 169 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 TRPT1Q86TN4 253 aaKnown RBP10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 POM121L12Q8N7R1 296 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 OR5H6Q8NGV6 325 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 BORCS5Q969J3 196 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 TXN2Q99757 166 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 SCRT1Q9BWW7 348 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 VSIRQ9H7M9 311 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 TMEM14BQ9NUH8 114 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 EHFQ9NZC4 300 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 X6R8D5 127 aa10.12□□□□□ -0.79
SMARCA4-206ENST00000538456 KNCNA6PVL3 124 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 ZNF705EA8MWA4 302 aaPredicted RBP10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 TMEM127O75204 238 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 ZNF688P0C7X2 276 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 SPP1P10451 314 aa10.11□□□□□ -0.79
SMARCA4-206ENST00000538456 DUSP18Q8NEJ0 188 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms