RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PF4V1P10720 104 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 CXCL2P19875 107 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 RAB31Q13636 194 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 ZNF266Q14584 549 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 ZNF345Q14585 488 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 MRGPRG-AS1Q2M3A8 158 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 LGALSLQ3ZCW2 172 aaPredicted RBP8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 AKIRIN2Q53H80 203 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 C2orf83Q53S99 150 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 KCNRGQ8N5I3 272 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 TTC9CQ8N5M4 171 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 ZNF709Q8N972 641 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 OR1P1Q8NH06 330 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 MS4A10Q96PG2 267 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 P2RX4Q99571 388 aa8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 F11RQ9Y624 299 aaKnown RBP8.42□□□□□ -1.06
TNFRSF1A-211ENST00000538363 C2CD3Q4AC94 2353 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 LINC01548A6NM66 108 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 C15orf62A8K5M9 175 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 NPIPB5A8MRT5 1133 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 INS-IGF2F8WCM5 200 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 G3V318 75 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 BCL2L11O43521 198 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 HILS1P60008 231 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 UBA52P62987 128 aaKnown RBP8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 EXOSC2Q13868 293 aaKnown RBP8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 ACSM6Q6P461 480 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 TMEM14EPQ6UXP3 125 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 C9orf62Q8N4C0 152 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 FAM110DQ8TAY7 271 aaPredicted RBP8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 RNASEH2CQ8TDP1 164 aaKnown RBP8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 ATP5SQ99766 215 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 TMEM147Q9BVK8 224 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 UQCC1Q9NVA1 299 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 FBXL17Q9UF56 701 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 FBXL7Q9UJT9 491 aa8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 SETD2Q9BYW2 2564 aaPredicted RBP8.41□□□□□ -1.06
TNFRSF1A-211ENST00000538363 MTORP42345 2549 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 IGHV3-21A0A0B4J1V1 117 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 CGB1A6NKQ9 187 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 G3V3Q6 166 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 CLDN34H7C241 214 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 FBXO24O75426 580 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 OR2J3O76001 311 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 JTBO76095 146 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 PRH1P02810 166 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 TRGV3P03979 118 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 AMY1AP04745 511 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 RNASE1P07998 156 aaKnown RBP8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 CTRB1P17538 263 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 GPX4P36969 197 aaPredicted RBP8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 NDPQ00604 133 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 ATP5G2Q06055 141 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 CTRB2Q6GPI1 263 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 EIF5AL1Q6IS14 154 aaKnown RBP8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 STPG2Q8N412 459 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 UBAC2Q8NBM4 344 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 ACY3Q96HD9 319 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 NOL4LQ96MY1 436 aaPredicted RBP8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 C11orf1Q9H5F2 150 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 FBXO7Q9Y3I1 522 aa8.4□□□□□ -1.06
TNFRSF1A-211ENST00000538363 HIVEP2P31629 2446 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 FN1P02751 2386 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 UBE2L5PA0A1B0GUS4 154 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 A0A1B0GW64 132 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 PSMB11A5LHX3 300 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RNF222A6NCQ9 220 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 C17orf112F2Z3M2 114 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 MT-CO2P00403 227 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 IGF1P05019 195 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TPT1P13693 172 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 FGF7P21781 194 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 MFAP4P55083 255 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TPPP2P59282 170 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RPL15P61313 204 aaKnown RBP8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 DLK1P80370 383 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 Q56UQ5 140 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 SLC16A13Q7RTY0 426 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 SLC51BQ86UW2 128 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ZNF114Q8NC26 417 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 CACNG8Q8WXS5 425 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 GGACTQ9BVM4 153 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NPVFQ9HCQ7 196 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ZFHX3Q15911 3703 aa8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NSD1Q96L73 2696 aaPredicted RBP8.39□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NIPBLQ6KC79 2804 aaeCLIP8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 A0A0G2JLM5 398 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 ZFP92A6NM28 416 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 GNG7O60262 68 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 IGHV3-48P01763 117 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 FABP1P07148 127 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 CRYGCP07315 174 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 EGR2P11161 476 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 NPBWR1P48145 328 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 SSBP2P81877 361 aaPredicted RBP8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RHOGP84095 191 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 CD69Q07108 199 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 TMEM95Q3KNT9 176 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 KHDC1LQ5JSQ8 128 aa8.38□□□□□ -1.07
TNFRSF1A-211ENST00000538363 RPL7L1Q6DKI1 246 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms