RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 HLA-DRB1P01911 266 aa8.81□□□□□ -1
RTN3-208ENST00000537981 RAB31Q13636 194 aa8.81□□□□□ -1
RTN3-208ENST00000537981 CR1LQ2VPA4 569 aa8.81□□□□□ -1
RTN3-208ENST00000537981 IBA57Q5T440 356 aaKnown RBP8.81□□□□□ -1
RTN3-208ENST00000537981 BPIFA4PQ86YQ2 179 aa8.81□□□□□ -1
RTN3-208ENST00000537981 LRRC29Q8WV35 223 aa8.81□□□□□ -1
RTN3-208ENST00000537981 MBD6Q96DN6 1003 aa8.81□□□□□ -1
RTN3-208ENST00000537981 BMFQ96LC9 184 aa8.81□□□□□ -1
RTN3-208ENST00000537981 C9JCJ5 164 aa8.8□□□□□ -1
RTN3-208ENST00000537981 H3BRM9 83 aa8.8□□□□□ -1
RTN3-208ENST00000537981 K7ERJ3 54 aa8.8□□□□□ -1
RTN3-208ENST00000537981 FGF6P10767 208 aa8.8□□□□□ -1
RTN3-208ENST00000537981 CA6P23280 308 aa8.8□□□□□ -1
RTN3-208ENST00000537981 BRWD1-AS2P59051 145 aa8.8□□□□□ -1
RTN3-208ENST00000537981 VSTM2AQ8TAG5 236 aa8.8□□□□□ -1
RTN3-208ENST00000537981 FGFBP3Q8TAT2 258 aa8.8□□□□□ -1
RTN3-208ENST00000537981 C10orf35Q96D05 121 aa8.8□□□□□ -1
RTN3-208ENST00000537981 OR2V2Q96R30 315 aa8.8□□□□□ -1
RTN3-208ENST00000537981 ZNF331Q9NQX6 463 aaPredicted RBP8.8□□□□□ -1
RTN3-208ENST00000537981 TNFRSF18Q9Y5U5 241 aa8.8□□□□□ -1
RTN3-208ENST00000537981 BDP1A6H8Y1 2624 aa8.8□□□□□ -1
RTN3-208ENST00000537981 A0A1W2PRE2 83 aa8.8□□□□□ -1
RTN3-208ENST00000537981 TNFSF11O14788 317 aa8.8□□□□□ -1
RTN3-208ENST00000537981 LEPROTL1O95214 131 aa8.8□□□□□ -1
RTN3-208ENST00000537981 P04436 131 aa8.8□□□□□ -1
RTN3-208ENST00000537981 NTF4P34130 210 aa8.8□□□□□ -1
RTN3-208ENST00000537981 TREML4Q6UXN2 200 aa8.8□□□□□ -1
RTN3-208ENST00000537981 Q6ZS49 121 aa8.8□□□□□ -1
RTN3-208ENST00000537981 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
RTN3-208ENST00000537981 YRDCQ86U90 279 aaKnown RBP8.8□□□□□ -1
RTN3-208ENST00000537981 ZNF808Q8N4W9 903 aaPredicted RBP8.8□□□□□ -1
RTN3-208ENST00000537981 DRAM1Q8N682 238 aa8.8□□□□□ -1
RTN3-208ENST00000537981 SPAG8Q99932 426 aaPredicted RBP8.8□□□□□ -1
RTN3-208ENST00000537981 C1QTNF5Q9BXJ0 243 aa8.8□□□□□ -1
RTN3-208ENST00000537981 R4GN57 208 aa8.8□□□□□ -1
RTN3-208ENST00000537981 SMG1Q96Q15 3661 aaKnown RBP8.79□□□□□ -1
RTN3-208ENST00000537981 LRRC30A6NM36 301 aa8.79□□□□□ -1
RTN3-208ENST00000537981 C21orf140B9A014 251 aa8.79□□□□□ -1
RTN3-208ENST00000537981 NPIPA3F8WFD2 350 aa8.79□□□□□ -1
RTN3-208ENST00000537981 SYNGR1O43759 233 aa8.79□□□□□ -1
RTN3-208ENST00000537981 RBMXL2O75526 392 aaKnown RBP8.79□□□□□ -1
RTN3-208ENST00000537981 CXorf1O96002 111 aa8.79□□□□□ -1
RTN3-208ENST00000537981 HBZP02008 142 aa8.79□□□□□ -1
RTN3-208ENST00000537981 COX8AP10176 69 aa8.79□□□□□ -1
RTN3-208ENST00000537981 CRYGSP22914 178 aa8.79□□□□□ -1
RTN3-208ENST00000537981 GPM6AP51674 278 aa8.79□□□□□ -1
RTN3-208ENST00000537981 TMEM42Q69YG0 159 aa8.79□□□□□ -1
RTN3-208ENST00000537981 OOSP2Q86WS3 158 aa8.79□□□□□ -1
RTN3-208ENST00000537981 NUP35Q8NFH5 326 aa8.79□□□□□ -1
RTN3-208ENST00000537981 ARPC1AQ92747 370 aa8.79□□□□□ -1
RTN3-208ENST00000537981 WDR83OSQ9Y284 106 aa8.79□□□□□ -1
RTN3-208ENST00000537981 COL5A1P20908 1838 aaPredicted RBP8.79□□□□□ -1
RTN3-208ENST00000537981 PCSK5Q92824 1860 aa8.79□□□□□ -1
RTN3-208ENST00000537981 DOCK10Q96BY6 2186 aa8.79□□□□□ -1
RTN3-208ENST00000537981 IZUMO1RA6ND01 250 aa8.79□□□□□ -1
RTN3-208ENST00000537981 SMIM17P0DL12 118 aa8.79□□□□□ -1
RTN3-208ENST00000537981 MZT1Q08AG7 82 aa8.79□□□□□ -1
RTN3-208ENST00000537981 KLF5Q13887 457 aaPredicted RBP8.79□□□□□ -1
RTN3-208ENST00000537981 PIP4P2Q8N4L2 257 aa8.79□□□□□ -1
RTN3-208ENST00000537981 C11orf52Q96A22 123 aa8.79□□□□□ -1
RTN3-208ENST00000537981 GGTLC1Q9BX51 225 aa8.79□□□□□ -1
RTN3-208ENST00000537981 SAP30LQ9HAJ7 183 aa8.79□□□□□ -1
RTN3-208ENST00000537981 B4GALT7Q9UBV7 327 aa8.79□□□□□ -1
RTN3-208ENST00000537981 ZNF318Q5VUA4 2279 aa8.78□□□□□ -1
RTN3-208ENST00000537981 IGKV3D-11A0A0A0MRZ8 115 aa8.78□□□□□ -1
RTN3-208ENST00000537981 GFERP55789 205 aa8.78□□□□□ -1
RTN3-208ENST00000537981 SEC11AP67812 179 aa8.78□□□□□ -1
RTN3-208ENST00000537981 LTC4SQ16873 150 aa8.78□□□□□ -1
RTN3-208ENST00000537981 CEACAM16Q2WEN9 425 aa8.78□□□□□ -1
RTN3-208ENST00000537981 LYSMD4Q5XG99 296 aa8.78□□□□□ -1
RTN3-208ENST00000537981 MIR17HGQ75NE6 70 aa8.78□□□□□ -1
RTN3-208ENST00000537981 RNF183Q96D59 192 aa8.78□□□□□ -1
RTN3-208ENST00000537981 SH2D2AQ9NP31 389 aa8.78□□□□□ -1
RTN3-208ENST00000537981 PSG8Q9UQ74 426 aa8.78□□□□□ -1
RTN3-208ENST00000537981 FAM186AA6NE01 2351 aa8.78□□□□□ -1
RTN3-208ENST00000537981 KIR2DS1A0A191URI9 304 aa8.78□□□□□ -1
RTN3-208ENST00000537981 hCG_38984A0A1B0GV85 526 aa8.78□□□□□ -1
RTN3-208ENST00000537981 OOEPA6NGQ2 149 aa8.78□□□□□ -1
RTN3-208ENST00000537981 C17orf98A8MV24 154 aa8.78□□□□□ -1
RTN3-208ENST00000537981 A8MZ25 164 aa8.78□□□□□ -1
RTN3-208ENST00000537981 GGTLC3B5MD39 225 aa8.78□□□□□ -1
RTN3-208ENST00000537981 KLRC4-KLRK1H3BQV0 150 aa8.78□□□□□ -1
RTN3-208ENST00000537981 FTH1P19P0C7X4 201 aa8.78□□□□□ -1
RTN3-208ENST00000537981 KIR2DS4P43632 304 aa8.78□□□□□ -1
RTN3-208ENST00000537981 HERV-K104P63124 156 aa8.78□□□□□ -1
RTN3-208ENST00000537981 AESQ08117 197 aa8.78□□□□□ -1
RTN3-208ENST00000537981 KIR2DS1Q14954 304 aa8.78□□□□□ -1
RTN3-208ENST00000537981 GUSBP1Q15486 140 aa8.78□□□□□ -1
RTN3-208ENST00000537981 EFNB3Q15768 340 aa8.78□□□□□ -1
RTN3-208ENST00000537981 RHBDD2Q6NTF9 364 aa8.78□□□□□ -1
RTN3-208ENST00000537981 Q6ZSR6 202 aa8.78□□□□□ -1
RTN3-208ENST00000537981 ST8SIA1Q92185 356 aa8.78□□□□□ -1
RTN3-208ENST00000537981 C16orf92Q96LL3 132 aa8.78□□□□□ -1
RTN3-208ENST00000537981 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
RTN3-208ENST00000537981 ADAMTS20P59510 1910 aa8.78□□□□□ -1
RTN3-208ENST00000537981 TRAV24A0A0B4J272 114 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 C5orf49A4QMS7 147 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 ANKRD30BLA7E2S9 258 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 SYNGR3O43761 229 aa8.77□□□□□ -1.01
RTN3-208ENST00000537981 TSPAN13O95857 204 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms