RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 Q6ZRM9 215 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 LYZL4Q96KX0 146 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 OR2W1Q9Y3N9 320 aa9.05□□□□□ -0.96
CLSTN3-207ENST00000537408 HTTP42858 3142 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 SCTP09683 121 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 IL11P20809 199 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 RPL8P62917 257 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 SPINK14Q6IE38 97 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 PQLC2Q6ZP29 291 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 Q6ZS49 121 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 ZNF611Q8N823 705 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 A0A1W2PQD3 144 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 DSCR4P56555 118 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 DOLPP1Q86YN1 238 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 HIF1ANQ9NWT6 349 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 ERG28Q9UKR5 140 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 OBSL1O75147 1896 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 FAM90A27PA6NNH2 459 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 MPDU1O75352 247 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 KLF7O75840 302 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 TUSC2O75896 110 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 IGHV3-9P01782 118 aa9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 WIPI1Q5MNZ9 446 aaPredicted RBP9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 MRPL14Q6P1L8 145 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 RNASE7Q9H1E1 156 aaKnown RBP9.04□□□□□ -0.96
CLSTN3-207ENST00000537408 M0R135 149 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 DEFA4P12838 97 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 CCL2P13500 99 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 WIPF2Q8TF74 440 aaPredicted RBP9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 IL1F10Q8WWZ1 152 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 C11orf52Q96A22 123 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 ZNF799Q96GE5 643 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 PLEKHA3Q9HB20 300 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 IGHV3-15A0A0B4J1V0 119 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 GCHFRP30047 84 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 AKIRIN1Q9H9L7 192 aaPredicted RBP9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 SDK2Q58EX2 2172 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 SMIM27A0A1W2PRY6 76 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 TAS2R45P59539 299 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 KIR3DL3Q8N743 410 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 FLVCR1-AS1Q8TAF5 88 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 ZNF524Q96C55 264 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 VGLL1Q99990 258 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 GGTLC1Q9BX51 225 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 GCM1Q9NP62 436 aa9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.03□□□□□ -0.96
CLSTN3-207ENST00000537408 RTL8BQ17RB0 113 aa9.02□□□□□ -0.96
CLSTN3-207ENST00000537408 ZNF808Q8N4W9 903 aaPredicted RBP9.02□□□□□ -0.96
CLSTN3-207ENST00000537408 H1FXQ92522 213 aaKnown RBP9.02□□□□□ -0.96
CLSTN3-207ENST00000537408 OXGR1Q96P68 337 aa9.02□□□□□ -0.96
CLSTN3-207ENST00000537408 C19orf24Q9BVV8 132 aa9.02□□□□□ -0.96
CLSTN3-207ENST00000537408 COX6A1P12074 109 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 CRIP3Q6Q6R5 217 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 SHISA5Q8N114 240 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 TTC9CQ8N5M4 171 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 OR1L1Q8NH94 360 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 CACNG8Q8WXS5 425 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 RNF183Q96D59 192 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 RABAC1Q9UI14 185 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 DOPEY2Q9Y3R5 2298 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 TNFSF11O14788 317 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 CAMPP49913 170 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 IGLV3-21P80748 117 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 C12orf49Q9H741 205 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 SPANXB1Q9NS25 103 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 YTHDF2Q9Y5A9 579 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A10PA6NDY2 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A18PA6NE21 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A16PA6NEW6 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A20PA6NIJ5 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A8PA6NJQ4 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A7PA6NKC0 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A22PA8MWA6 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A12PA8MX19 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A5PA8MXJ8 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A23PA8MXZ1 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A15PP0C7V4 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A13PP0C7W8 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A14PP0C7W9 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 FAM90A24PP0C7X0 464 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 RPS16P62249 146 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 C8orf86Q6ZUL3 223 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 C2orf91Q6ZV80 131 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 ZNF645Q8N7E2 425 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 HARBI1Q96MB7 349 aa9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 TECRQ9NZ01 308 aaKnown RBP9.02□□□□□ -0.97
CLSTN3-207ENST00000537408 A0A1W2PRE2 83 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 HSPB6O14558 160 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 IGKV1-5P01602 117 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 CT45A6P0DMU7 189 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 CT45A5P0DMU8 189 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 CT45A7P0DMV0 189 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 CT45A1Q5HYN5 189 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 CT45A3Q8NHU0 189 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 ATP23Q9Y6H3 246 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 CELA2AP08217 269 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 ODF1Q14990 250 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 ZNF718Q3SXZ3 478 aa9.01□□□□□ -0.97
CLSTN3-207ENST00000537408 SMIM20Q8N5G0 67 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms