RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SPATA25Q9BR10 227 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 ZC4H2Q9NQZ6 224 aa9.41□□□□□ -0.9
PRKDC-207ENST00000536483 C3orf85A0A1B0GTC6 90 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 MFSD2BA6NFX1 497 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 SNRPGP15A8MWD9 76 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 PPP5D1E7EU14 171 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 OR2C1O95371 312 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 CLEC3BP05452 202 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 AKAIN1P0CW23 69 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 C8orf88P0DMB2 117 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 FCGR2BP31994 310 aaPredicted RBP9.4□□□□□ -0.9
PRKDC-207ENST00000536483 ARL3P36405 182 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 MFAP2P55001 183 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 ELLP55199 621 aaPredicted RBP9.4□□□□□ -0.9
PRKDC-207ENST00000536483 HSPE1P61604 102 aaKnown RBP9.4□□□□□ -0.9
PRKDC-207ENST00000536483 HAGHQ16775 308 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 FAM106AQ4KMX7 169 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 PVRIGQ6DKI7 326 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 LCN12Q6JVE5 192 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 CLEC19AQ6UXS0 136 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 H2BFWTQ7Z2G1 175 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 OR2C3Q8N628 320 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 OR13C8Q8NGS7 320 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 TP53RKQ96S44 253 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 RTBDNQ9BSG5 229 aaPredicted RBP9.4□□□□□ -0.9
PRKDC-207ENST00000536483 MED28Q9H204 178 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 GPN1Q9HCN4 374 aaPredicted RBP9.4□□□□□ -0.9
PRKDC-207ENST00000536483 NUDT15Q9NV35 164 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 TECRQ9NZ01 308 aaKnown RBP9.4□□□□□ -0.9
PRKDC-207ENST00000536483 GPR132Q9UNW8 380 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 NSG2Q9Y328 171 aa9.4□□□□□ -0.9
PRKDC-207ENST00000536483 A0A0B4J293 547 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 C2orf70A6NJV1 201 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 DISC1C4P0D8 188 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 ATG12O94817 140 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 NDUFB6O95139 128 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 CDS2O95674 445 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 IGKV1-5P01602 117 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 C1QBP02746 253 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 FOLR2P14207 255 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 PGAM2P15259 253 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 PRCDQ00LT1 54 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 RBMS2Q15434 407 aaKnown RBP9.39□□□□□ -0.91
PRKDC-207ENST00000536483 DEFB114Q30KQ6 69 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 RNASE12Q5GAN4 147 aaKnown RBP9.39□□□□□ -0.91
PRKDC-207ENST00000536483 SPSB3Q6PJ21 355 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 NOXA1Q86UR1 476 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 CCDC71LQ8N9Z2 235 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 OR4A16Q8NH70 328 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 ASB13Q8WXK3 278 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 PRRT1Q99946 306 aa9.39□□□□□ -0.91
PRKDC-207ENST00000536483 SLC25A21Q9BQT8 299 aaPredicted RBP9.39□□□□□ -0.91
PRKDC-207ENST00000536483 ZNF436Q9C0F3 470 aaPredicted RBP9.39□□□□□ -0.91
PRKDC-207ENST00000536483 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 F8W735 103 aaPredicted RBP9.38□□□□□ -0.91
PRKDC-207ENST00000536483 K7EIM0 57 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 HLA-AP01891 365 aaKnown RBP9.38□□□□□ -0.91
PRKDC-207ENST00000536483 PI3P19957 117 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 CBLN1P23435 193 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 CD300CQ08708 224 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 NDUFA5Q16718 116 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 OR4C16Q8NGL9 310 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 MARCH1Q8TCQ1 289 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 SCARB1Q8WTV0 552 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 GLYATL2Q8WU03 294 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 MARC2Q969Z3 335 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 BSCL2Q96G97 398 aaPredicted RBP9.38□□□□□ -0.91
PRKDC-207ENST00000536483 HYLS1Q96M11 299 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 TMEM222Q9H0R3 208 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 C20orf85Q9H1P6 137 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 C5orf66Q9H5L9 145 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 TUBA4BQ9H853 241 aa9.38□□□□□ -0.91
PRKDC-207ENST00000536483 TMEM213A2RRL7 107 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 RGS13O14921 159 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 TGOLN2O43493 480 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
PRKDC-207ENST00000536483 SCGB2B2Q4G0G5 96 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 SLC25A24Q6NUK1 477 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 GTSCR1Q86UQ5 136 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 FAM219AQ8IW50 185 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 GALNT14Q96FL9 552 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 TXN2Q99757 166 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 RETNQ9HD89 108 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 SCP2D1Q9UJQ7 156 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 TMEM56-RWDD3S4R434 201 aa9.37□□□□□ -0.91
PRKDC-207ENST00000536483 TRAV6A0A075B6T7 132 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 TEX13DA0A0J9YY54 714 aaPredicted RBP9.36□□□□□ -0.91
PRKDC-207ENST00000536483 CRYM-AS1A6NIL9 109 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 I3L2K1 104 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 IGHV3-23P01764 117 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 ANXA3P12429 323 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 GPR183P32249 361 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 DHODHQ02127 395 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 FAAP20Q6NZ36 180 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 LINC00322Q6ZN03 302 aaPredicted RBP9.36□□□□□ -0.91
PRKDC-207ENST00000536483 OR51S1Q8NGJ8 323 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 OR52E5Q8NH55 327 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 ZNF414Q96IQ9 312 aa9.36□□□□□ -0.91
PRKDC-207ENST00000536483 SCGB3A2Q96PL1 93 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms