RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TMED4Q7Z7H5 227 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 SLC35G3Q8N808 338 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 OR1L6Q8NGR2 347 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 DYNLRB2Q8TF09 96 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 GALNT14Q96FL9 552 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 ZNF436Q9C0F3 470 aaPredicted RBP9.94□□□□□ -0.82
PRKDC-206ENST00000536429 MLXQ9UH92 298 aa9.94□□□□□ -0.82
PRKDC-206ENST00000536429 IGHV3OR16-8A0A075B7F1 116 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 ZNF785A8K8V0 405 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 INS-IGF2F8WCM5 200 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 NXPH3O95157 252 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 FRMD6-AS1P0C7T7 363 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 IGHV4-30-4P0DP06 118 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 RNASE2P10153 161 aaKnown RBP9.93□□□□□ -0.82
PRKDC-206ENST00000536429 Q56UQ5 140 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 ZNF57Q68EA5 555 aaPredicted RBP9.93□□□□□ -0.82
PRKDC-206ENST00000536429 LCN12Q6JVE5 192 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 LYZL2Q7Z4W2 148 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 SBSPONQ8IVN8 264 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 UXS1Q8NBZ7 420 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 PINX1Q96BK5 328 aaKnown RBP9.93□□□□□ -0.82
PRKDC-206ENST00000536429 WDR89Q96FK6 387 aaPredicted RBP9.93□□□□□ -0.82
PRKDC-206ENST00000536429 BSCL2Q96G97 398 aaPredicted RBP9.93□□□□□ -0.82
PRKDC-206ENST00000536429 SCGB3A2Q96PL1 93 aa9.93□□□□□ -0.82
PRKDC-206ENST00000536429 KMT2CQ8NEZ4 4911 aaKnown RBP9.93□□□□□ -0.82
PRKDC-206ENST00000536429 STAB2Q8WWQ8 2551 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 LINC00854A0A1B0GVQ3 168 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 CTSGP08311 255 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 CCR6P51684 374 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 PVRIGQ6DKI7 326 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 BTNL8Q6UX41 500 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 FAM219AQ8IW50 185 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 TMEM190Q8WZ59 177 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 PDCD10Q9BUL8 212 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.92□□□□□ -0.82
PRKDC-206ENST00000536429 MRPL36Q9P0J6 103 aaKnown RBP9.92□□□□□ -0.82
PRKDC-206ENST00000536429 KCNIP3Q9Y2W7 256 aa9.92□□□□□ -0.82
PRKDC-206ENST00000536429 ZNF207O43670 478 aaKnown RBP9.91□□□□□ -0.82
PRKDC-206ENST00000536429 CD7P09564 240 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 C8orf88P0DMB2 117 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 SNCAP37840 140 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 MFAP4P55083 255 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 SPCS3P61009 180 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 MLANAQ16655 118 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 BSXQ3C1V8 233 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 ANKRD55Q3KP44 614 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 NMSQ5H8A3 153 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 SPSB3Q6PJ21 355 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 TMEM61Q8N0U2 210 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 OR2K2Q8NGT1 345 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 OR52E5Q8NH55 327 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 IL22RA2Q969J5 263 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 WFDC10AQ9H1F0 79 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 FNDC4Q9H6D8 234 aaPredicted RBP9.91□□□□□ -0.82
PRKDC-206ENST00000536429 NDUFA13Q9P0J0 144 aa9.91□□□□□ -0.82
PRKDC-206ENST00000536429 A0A0B4J2A0 478 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 FCGR2BP31994 310 aaPredicted RBP9.9□□□□□ -0.82
PRKDC-206ENST00000536429 PPP1R1AQ13522 171 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 GUCA2BQ16661 112 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 TRIQKQ629K1 86 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 TMEM170AQ8WVE7 144 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 ATP6V0BQ99437 205 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 SLC25A21Q9BQT8 299 aaPredicted RBP9.9□□□□□ -0.82
PRKDC-206ENST00000536429 C20orf24Q9BUV8 137 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 ENY2Q9NPA8 101 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 C19orf73Q9NVV2 129 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 TECRQ9NZ01 308 aaKnown RBP9.9□□□□□ -0.82
PRKDC-206ENST00000536429 SHPKQ9UHJ6 478 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 FLVCR2Q9UPI3 526 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 UFC1Q9Y3C8 167 aa9.9□□□□□ -0.82
PRKDC-206ENST00000536429 TENM3Q9P273 2699 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 NDUFA4O00483 81 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 SCAF4O95104 1147 aaKnown RBP9.89□□□□□ -0.83
PRKDC-206ENST00000536429 NHLRC4P0CG21 123 aaPredicted RBP9.89□□□□□ -0.83
PRKDC-206ENST00000536429 SULT1A3P0DMM9 295 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 SULT1A4P0DMN0 295 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 VAMP1P23763 118 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 BTCP35070 178 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 CD81P60033 236 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 GTSCR1Q86UQ5 136 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 LGI3Q8N145 548 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 DEDD2Q8WXF8 326 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 PALMDQ9NP74 551 aa9.89□□□□□ -0.83
PRKDC-206ENST00000536429 CEBPZOSA8MTT3 80 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 NUPL2O15504 423 aaKnown RBP9.88□□□□□ -0.83
PRKDC-206ENST00000536429 SFT2D2O95562 160 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 ANXA3P12429 323 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 IL7P13232 177 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 INPP1P49441 399 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 ELLP55199 621 aaPredicted RBP9.88□□□□□ -0.83
PRKDC-206ENST00000536429 TMEM128Q5BJH2 165 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 TXN2Q99757 166 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 NEURL2Q9BR09 285 aa9.88□□□□□ -0.83
PRKDC-206ENST00000536429 HEYLQ9NQ87 328 aaPredicted RBP9.88□□□□□ -0.83
PRKDC-206ENST00000536429 DAZ1Q9NQZ3 744 aaKnown RBP9.88□□□□□ -0.83
PRKDC-206ENST00000536429 MRPL27Q9P0M9 148 aaKnown RBP9.88□□□□□ -0.83
PRKDC-206ENST00000536429 IGHV3-49A0A0A0MS15 119 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 A8MZ25 164 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 GNG7O60262 68 aa9.87□□□□□ -0.83
PRKDC-206ENST00000536429 YIF1AO95070 293 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms