RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 COPZ2Q9P299 210 aa9.86□□□□□ -0.83
CLSTN3-205ENST00000535452 K7EIM0 57 aa9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 MT-CO2P00403 227 aa9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 HOXA1P49639 335 aaPredicted RBP9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 UCP3P55916 312 aa9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 LINC00476Q8WZB0 136 aa9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 MRGPRFQ96AM1 343 aa9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 RARRES2Q99969 163 aa9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 CHRDL1Q9BU40 450 aa9.85□□□□□ -0.83
CLSTN3-205ENST00000535452 CTSGP08311 255 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 FCGR2BP31994 310 aaPredicted RBP9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 ZNF600Q6ZNG1 722 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 TCF24Q7RTU0 167 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 STHQ8IWL8 128 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 ZNF114Q8NC26 417 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 ZFAND1Q8TCF1 268 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 GPX8Q8TED1 209 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 TMEM230Q96A57 120 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 RNF2Q99496 336 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 NXF2Q9GZY0 626 aaKnown RBP9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 MAP6D1Q9H9H5 199 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 ANAPC10Q9UM13 185 aa9.84□□□□□ -0.83
CLSTN3-205ENST00000535452 IGHV3-49A0A0A0MS15 119 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 RPS10-NUDT3A0A1W2PQS6 291 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 CHEK1O14757 476 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 B3GALNT1O75752 331 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 DFFBO76075 338 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 TBPP20226 339 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 ADMP35318 185 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 APRG1Q8IVJ8 170 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 GBGT1Q8N5D6 347 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 ARRDC1Q8N5I2 433 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 METTL26Q96S19 204 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 RABAC1Q9UI14 185 aa9.83□□□□□ -0.84
CLSTN3-205ENST00000535452 DYNC2H1Q8NCM8 4307 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 CA1P00915 261 aaPredicted RBP9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 NPPCP23582 126 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 OPRK1P41145 380 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 PIGPP57054 158 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 TMEM187Q14656 261 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 RBMS2Q15434 407 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 TMEM41BQ5BJD5 291 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 C11orf45Q8TAV5 145 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 YIPF6Q96EC8 236 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 SEC22AQ96IW7 307 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 OR10C1Q96KK4 312 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 FBXL17Q9UF56 701 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 CACFD1Q9UGQ2 172 aa9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 C14orf166Q9Y224 244 aaKnown RBP9.82□□□□□ -0.84
CLSTN3-205ENST00000535452 TRAV30A0A087WSZ9 112 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 C3orf85A0A1B0GTC6 90 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 I3L2K1 104 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 TGFBR1P36897 503 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 MFAP2P55001 183 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 SCGB2B2Q4G0G5 96 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 NOXA1Q86UR1 476 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 LYSMD2Q8IV50 215 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 OR11H2Q8NH07 326 aa9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 PHLDA1Q8WV24 401 aaPredicted RBP9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 PUS1Q9Y606 427 aaKnown RBP eCLIP9.81□□□□□ -0.84
CLSTN3-205ENST00000535452 DNAH7Q8WXX0 4024 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 IGHV3OR16-13A0A075B7E8 117 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 IGHV3-74A0A0B4J1X5 117 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 TRAV2A0A0B4J234 112 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 M0QYG6 137 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 HPGDSO60760 199 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 TAS2R19P59542 299 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 RND3P61587 244 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 NCS1P62166 190 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 RNASE12Q5GAN4 147 aaKnown RBP9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 FUNDC2Q9BWH2 189 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
CLSTN3-205ENST00000535452 TEX13DA0A0J9YY54 714 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 HELTA6NFD8 242 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 RGS5O15539 181 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 IGHV3-48P01763 117 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 ELK1P19419 428 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 PPP5CP53041 499 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 AP2S1P53680 142 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 TCTAP57738 103 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 VBP1P61758 197 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 MEF2DQ14814 521 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 SPINK9Q5DT21 86 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 ETFRF1Q6IPR1 90 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 TOMM20LQ6UXN7 152 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 FAM219AQ8IW50 185 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 STXBP6Q8NFX7 210 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 EXTL2Q9UBQ6 330 aa9.79□□□□□ -0.84
CLSTN3-205ENST00000535452 PIGBOS1A0A0B4J2F0 54 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 DBX1A6NMT0 343 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 DISC1C4P0D8 188 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 F8W735 103 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 HTR2BP41595 481 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 DEFB131AP59861 70 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 NUTF2P61970 127 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 MRPS10P82664 201 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 MORN3Q6PF18 240 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 C2CD4CQ8TF44 421 aa9.78□□□□□ -0.84
CLSTN3-205ENST00000535452 Q8WTZ3 238 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms