RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 GNG7O60262 68 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 CD3DP04234 171 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 CTSDP07339 412 aaPredicted RBP12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 PI3P19957 117 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 AKR1C2P52895 323 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 LHFPL1Q86WI0 220 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 MTFP1Q9UDX5 166 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 SMPXQ9UHP9 88 aa12.04□□□□□ -0.48
CLSTN3-204ENST00000535313 IGHV7-4-1A0A0J9YVY3 117 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 CCDC160A6NGH7 325 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 UBE2CO00762 179 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 SNCAP37840 140 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 TRIM16LQ309B1 348 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 Q6ZWC4 215 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 SLC35G3Q8N808 338 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 CCDC71LQ8N9Z2 235 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 ZFAND1Q8TCF1 268 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 TP53RKQ96S44 253 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 PDCD10Q9BUL8 212 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 RHPN1-AS1Q9BWJ2 59 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 COPZ2Q9P299 210 aa12.03□□□□□ -0.48
CLSTN3-204ENST00000535313 TRAV14DV4A0A0A6YYC5 116 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 C3orf85A0A1B0GTC6 90 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 CHEK1O14757 476 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 NOL3O60936 208 aaKnown RBP12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 IFNA17P01571 189 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 IGKV1-5P01602 117 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 IGHV3-48P01763 117 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 NPBWR1P48145 328 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 PPP5CP53041 499 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 TAS2R19P59542 299 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 IZUMO4Q1ZYL8 232 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 ODF3L2Q3SX64 289 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 SPINK9Q5DT21 86 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 STPG3Q8N7X2 389 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 TERB2Q8NHR7 220 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 OR10C1Q96KK4 312 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 ABHD1Q96SE0 405 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 RNF2Q99496 336 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 TP53TG1Q9Y2A0 90 aa12.02□□□□□ -0.49
CLSTN3-204ENST00000535313 IGHV3-49A0A0A0MS15 119 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 KIR2DL5BA0A0G2JN68 375 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 KIR2DL5BA0A0G2JPC4 375 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 SPRY2O43597 315 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 RAB3DO95716 219 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 BMI1P35226 326 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 CMC4P56277 68 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 SCGB2B2Q4G0G5 96 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 KIR2DL5AQ8N109 375 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 TMEM229BQ8NBD8 167 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 DUSP18Q8NEJ0 188 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 KIR2DL5BQ8NHK3 375 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 RNASE11Q8TAA1 199 aaKnown RBP12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 GINS3Q9BRX5 216 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 C6orf62Q9GZU0 229 aaPredicted RBP12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 ENY2Q9NPA8 101 aa12.01□□□□□ -0.49
CLSTN3-204ENST00000535313 A0A0B4J293 547 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 INS-IGF2F8WCM5 200 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 RGS5O15539 181 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 ST8SIA3O43173 380 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 CD74P04233 296 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 P0C879 139 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 RPL35AP18077 110 aaKnown RBP12□□□□□ -0.49
CLSTN3-204ENST00000535313 PLECQ15149 4684 aaKnown RBP12□□□□□ -0.49
CLSTN3-204ENST00000535313 DEFB135Q30KP9 77 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 SP6Q3SY56 376 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 STEAP1BQ6NZ63 245 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 OR4D10Q8NGI6 311 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 OR13C8Q8NGS7 320 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 RRNAD1Q96FB5 475 aaKnown RBP12□□□□□ -0.49
CLSTN3-204ENST00000535313 GALNT14Q96FL9 552 aa12□□□□□ -0.49
CLSTN3-204ENST00000535313 IGKV3-7A0A075B6H7 116 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 GABARAPH6UMI1 98 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 CORTO00230 105 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 B3GALNT1O75752 331 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 CD5P06127 495 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 TFPI2P48307 235 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 HOXA1P49639 335 aaPredicted RBP11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 PAFAH1B2P68402 229 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 MRPS10P82664 201 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 ZNF414Q96IQ9 312 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 SOSTQ9BQB4 213 aa11.99□□□□□ -0.49
CLSTN3-204ENST00000535313 IGHV3OR16-13A0A075B7E8 117 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 IGHV3-74A0A0B4J1X5 117 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 A0A0J9YWU9 116 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 CXorf65A6NEN9 183 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 UCP1P25874 307 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 ETV6P41212 452 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 MEF2DQ14814 521 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 TOMM20LQ6UXN7 152 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 ZNF600Q6ZNG1 722 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 LYG2Q86SG7 212 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 APRG1Q8IVJ8 170 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 MCFD2Q8NI22 146 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 MARCH1Q8TCQ1 289 aa11.98□□□□□ -0.49
CLSTN3-204ENST00000535313 RNF183Q96D59 192 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms