RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 OR10G4Q8NGN3 311 aa18.91■□□□□ 0.62
PTPMT1-205ENST00000534775 OR10G9Q8NGN4 311 aa18.91■□□□□ 0.62
PTPMT1-205ENST00000534775 OR10G7Q8NGN6 311 aa18.91■□□□□ 0.62
PTPMT1-205ENST00000534775 NARS2Q96I59 477 aaKnown RBP18.91■□□□□ 0.62
PTPMT1-205ENST00000534775 Q8N9W7 124 aa18.9■□□□□ 0.62
PTPMT1-205ENST00000534775 ARPC1AQ92747 370 aa18.9■□□□□ 0.62
PTPMT1-205ENST00000534775 Q96MF0 132 aa18.9■□□□□ 0.62
PTPMT1-205ENST00000534775 RASL11BQ9BPW5 248 aa18.9■□□□□ 0.62
PTPMT1-205ENST00000534775 ACTR3CQ9C0K3 210 aaPredicted RBP18.9■□□□□ 0.62
PTPMT1-205ENST00000534775 TREM1Q9NP99 234 aa18.9■□□□□ 0.62
PTPMT1-205ENST00000534775 PXMP4Q9Y6I8 212 aa18.9■□□□□ 0.62
PTPMT1-205ENST00000534775 A0A0U1RQK1 487 aa18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 CYB5BO43169 146 aa18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 TGFAP01135 160 aa18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 RPL29P47914 159 aaKnown RBP18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 CX3CL1P78423 397 aa18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 OR1L6Q8NGR2 347 aa18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 LINC00052Q96N35 136 aa18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 SLC39A9Q9NUM3 307 aa18.89■□□□□ 0.62
PTPMT1-205ENST00000534775 A0A1B0GV50 99 aa18.89■□□□□ 0.61
PTPMT1-205ENST00000534775 APELAP0DMC3 54 aa18.89■□□□□ 0.61
PTPMT1-205ENST00000534775 ZNF726P1Q15940 193 aa18.89■□□□□ 0.61
PTPMT1-205ENST00000534775 RPP25LQ8N5L8 163 aaKnown RBP18.89■□□□□ 0.61
PTPMT1-205ENST00000534775 MISP3Q96FF7 219 aa18.89■□□□□ 0.61
PTPMT1-205ENST00000534775 PLXNB1O43157 2135 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 ASH1LQ9NR48 2969 aaKnown RBP18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 PTPN13Q12923 2485 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 CTXND1A0A1B0GTU2 59 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 HLA-DRB1P01911 266 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 FBP1P09467 338 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 IGHV4-31P0DP07 118 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 BPIFB3P59826 476 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 PEA15Q15121 130 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 GUK1Q16774 197 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 FNDC4Q9H6D8 234 aaPredicted RBP18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 CSMD2Q7Z408 3487 aa18.88■□□□□ 0.61
PTPMT1-205ENST00000534775 CD5P06127 495 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 CTRB1P17538 263 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 B2MP61769 119 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 MLANAQ16655 118 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 TMEM249Q2WGJ8 235 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 KLF17Q5JT82 389 aaPredicted RBP18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 MIC13Q5XKP0 118 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 CTRB2Q6GPI1 263 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 C22orf15Q8WYQ4 148 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 ACY3Q96HD9 319 aa18.87■□□□□ 0.61
PTPMT1-205ENST00000534775 TMEM218A2RU14 115 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 MAP1LC3B2A6NCE7 125 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 MFAP2P55001 183 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 SRSF3P84103 164 aaKnown RBP18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 FAM122CQ6P4D5 195 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 LCN15Q6UWW0 184 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 MAPK1IP1LQ8NDC0 245 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 OR2T6Q8NHC8 308 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 MAP1LC3BQ9GZQ8 125 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 EIF5A2Q9GZV4 153 aaKnown RBP18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 TMEM231Q9H6L2 316 aa18.86■□□□□ 0.61
PTPMT1-205ENST00000534775 AVPP01185 164 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 CRYGCP07315 174 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 DEFA4P12838 97 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 CCL20P78556 96 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 KRTAP1-3Q8IUG1 177 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 STPG3Q8N7X2 389 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 WNT10AQ9GZT5 417 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 SLC45A2Q9UMX9 530 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 APCP25054 2843 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 NPIPB5A8MRT5 1133 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 SEC14L6B5MCN3 397 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 YIF1AO95070 293 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 OR10J1P30954 320 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 CDC34P49427 236 aaPredicted RBP18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 PRR20EP86478 221 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 PRR20CP86479 221 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 PRR20DP86480 221 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 PRR20BP86481 221 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 PRR20AP86496 221 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 RBM14Q96PK6 669 aaKnown RBP18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 FAM103A1Q9BTL3 118 aaKnown RBP18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 SMDT1Q9H4I9 107 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 SLC25A22Q9H936 323 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 MOB4Q9Y3A3 225 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 NAV3Q8IVL0 2385 aa18.85■□□□□ 0.61
PTPMT1-205ENST00000534775 CR1P17927 2039 aa18.84■□□□□ 0.61
PTPMT1-205ENST00000534775 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.84■□□□□ 0.611e-11■■■■■ 33.4
PTPMT1-205ENST00000534775 IGHV7-81A0A0B4J1V7 117 aa18.84■□□□□ 0.61
PTPMT1-205ENST00000534775 SSX7Q7RTT5 188 aa18.84■□□□□ 0.61
PTPMT1-205ENST00000534775 SSX3Q99909 188 aa18.84■□□□□ 0.61
PTPMT1-205ENST00000534775 SLC25A33Q9BSK2 321 aa18.84■□□□□ 0.61
PTPMT1-205ENST00000534775 IGKV1OR2-108A0A075B7D4 117 aa18.83■□□□□ 0.61
PTPMT1-205ENST00000534775 NBPF19A0A087WUL8 3843 aa18.83■□□□□ 0.61
PTPMT1-205ENST00000534775 A0A1W2PPV4 95 aa18.83■□□□□ 0.61
PTPMT1-205ENST00000534775 RBFOX3A6NFN3 312 aa18.83■□□□□ 0.61
PTPMT1-205ENST00000534775 THAP8Q8NA92 274 aa18.83■□□□□ 0.61
PTPMT1-205ENST00000534775 NPIPB3Q92617 1050 aa18.83■□□□□ 0.61
PTPMT1-205ENST00000534775 ABCA12Q86UK0 2595 aa18.83■□□□□ 0.61
PTPMT1-205ENST00000534775 VPS13CQ709C8 3753 aa18.82■□□□□ 0.6
PTPMT1-205ENST00000534775 NDPQ00604 133 aa18.82■□□□□ 0.6
PTPMT1-205ENST00000534775 C19orf35Q6ZS72 473 aa18.82■□□□□ 0.6
PTPMT1-205ENST00000534775 TTC9CQ8N5M4 171 aa18.82■□□□□ 0.6
PTPMT1-205ENST00000534775 PIFOQ8TCI5 191 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms