RNA–Protein interactions for RNA: ENST00000534754.5

SORL1-213, Transcript of sortilin related receptor 1, humanhuman

TSL 3

Gene SORL1, Length 2,222 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-213ENST00000534754 CGAP01215 116 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 CDKN1BP46527 198 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 FOXF2Q12947 444 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 GABRA6Q16445 453 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 TBC1D28Q2M2D7 210 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 PQLC2Q6ZP29 291 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 MDP1Q86V88 176 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 ABHD12Q8N2K0 398 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 ZNF439Q8NDP4 499 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 COQ2Q96H96 371 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 RNASE7Q9H1E1 156 aaKnown RBP7.32□□□□□ -1.24
SORL1-213ENST00000534754 HES4Q9HCC6 221 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 TMEM167BQ9NRX6 74 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 CDC42EP3Q9UKI2 254 aa7.32□□□□□ -1.24
SORL1-213ENST00000534754 ADGRG4Q8IZF6 3080 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 SPTAN1Q13813 2472 aaKnown RBP7.31□□□□□ -1.24
SORL1-213ENST00000534754 IGHV2-26A0A0B4J1V2 119 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 IGHV3-43A0A0B4J1X8 118 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 ISLRO14498 428 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 APCSP02743 223 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 IGHV3-43DP0DP04 118 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 NTF3P20783 257 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 DUTP33316 252 aaKnown RBP7.31□□□□□ -1.24
SORL1-213ENST00000534754 SSTR5P35346 364 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 CA7P43166 264 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 GPR12P47775 334 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 TCL1AP56279 114 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 SLC35B1P78383 322 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 FXYD3Q14802 87 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 UNQ5815/PRO19632Q6UWF5 114 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 FAM19A2Q8N3H0 131 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 PNKDQ8N490 385 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 C9orf106Q8NAJ2 232 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 C1orf159Q96HA4 380 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 TRIB1Q96RU8 372 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 ALKBH7Q9BT30 221 aaPredicted RBP7.31□□□□□ -1.24
SORL1-213ENST00000534754 MRPL27Q9P0M9 148 aaKnown RBP7.31□□□□□ -1.24
SORL1-213ENST00000534754 SLC25A10Q9UBX3 287 aaPredicted RBP7.31□□□□□ -1.24
SORL1-213ENST00000534754 DOPEY1Q5JWR5 2465 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 IGHV2OR16-5A0A0B4J2B6 119 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 TRGV8A0A0C4DH27 118 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 IGHV1-69-2A0A0G2JMI3 117 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 DEFB108AA8MXU0 73 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 AHRRA9YTQ3 701 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 PRRG2O14669 202 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 SPINT2O43291 252 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 CRYBB3P26998 211 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 SELENOVP59797 346 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 C1orf185Q5T7R7 199 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 TET2Q6N021 2002 aaPredicted RBP7.31□□□□□ -1.24
SORL1-213ENST00000534754 MRPL54Q6P161 138 aaKnown RBP7.31□□□□□ -1.24
SORL1-213ENST00000534754 ATOH7Q8N100 152 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 CLEC7AQ9BXN2 247 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 DOPEY2Q9Y3R5 2298 aa7.31□□□□□ -1.24
SORL1-213ENST00000534754 TRAV9-2A0A087WT02 112 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 SMIM27A0A1W2PRY6 76 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 SMPD2O60906 423 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 ADH4P08319 380 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 RELBQ01201 579 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 RBPJQ06330 500 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 PSG5Q15238 335 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 FBLN7Q53RD9 439 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 IBA57Q5T440 356 aaKnown RBP7.3□□□□□ -1.24
SORL1-213ENST00000534754 TRAT1Q6PIZ9 186 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 MIR17HGQ75NE6 70 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 OR13A1Q8NGR1 328 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 RFESDQ8TAC1 157 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 PRR7Q8TB68 274 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 CORO2AQ92828 525 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 BCL2L2Q92843 193 aaPredicted RBP7.3□□□□□ -1.24
SORL1-213ENST00000534754 ZNF331Q9NQX6 463 aaPredicted RBP7.3□□□□□ -1.24
SORL1-213ENST00000534754 TCF19Q9Y242 345 aa7.3□□□□□ -1.24
SORL1-213ENST00000534754 IGHV2-70DA0A0C4DH43 119 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 IZUMO1RA6ND01 250 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 MBD3L4A6NDZ8 208 aaPredicted RBP7.29□□□□□ -1.24
SORL1-213ENST00000534754 MBD3L3A6NE82 208 aaPredicted RBP7.29□□□□□ -1.24
SORL1-213ENST00000534754 MBD3L5A6NJ08 208 aaPredicted RBP7.29□□□□□ -1.24
SORL1-213ENST00000534754 IQCF6A8MYZ5 107 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 WNT9BO14905 357 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 ACTL6BO94805 426 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 USF1P22415 310 aaPredicted RBP7.29□□□□□ -1.24
SORL1-213ENST00000534754 TNFSF4P23510 183 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 PRR20EP86478 221 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 PRR20CP86479 221 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 PRR20DP86480 221 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 PRR20BP86481 221 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 PRR20AP86496 221 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 LCN12Q6JVE5 192 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 VKORC1L1Q8N0U8 176 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 LYG1Q8N1E2 194 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 OR4C5Q8NGB2 326 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 MBD3L2Q8NHZ7 208 aaPredicted RBP7.29□□□□□ -1.24
SORL1-213ENST00000534754 C18orf32Q8TCD1 76 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 Q8TCH9 128 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 SERTAD4Q9NUC0 356 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 ICE1Q9Y2F5 2266 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 LOC105371242A0A075B767 164 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.29□□□□□ -1.24
SORL1-213ENST00000534754 IGLC7A0M8Q6 106 aa7.29□□□□□ -1.24
SORL1-213ENST00000534754 M0R1X1 148 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms