RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 PPP1R3CQ9UQK1 317 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 WDR83OSQ9Y284 106 aa15.79■□□□□ 0.12
SMPD1-210ENST00000534405 SYS1-DBNDD2H3BUS1 97 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 SP9P0CG40 484 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 RNASEKQ6P5S7 137 aaKnown RBP15.78■□□□□ 0.12
SMPD1-210ENST00000534405 RASL11AQ6T310 242 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 FGFRL1Q8N441 504 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 OR2K2Q8NGT1 345 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 OR4A5Q8NH83 315 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 FAM222BQ8WU58 562 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 JKAMPQ9P055 326 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 TCL1AP56279 114 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 CKS1BP61024 79 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 ERVK11-1P61568 191 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 HSD52Q0P140 79 aa15.78■□□□□ 0.12
SMPD1-210ENST00000534405 IZUMO1RA6ND01 250 aa15.77■□□□□ 0.12
SMPD1-210ENST00000534405 NPIPB11E5RHQ5 1161 aa15.77■□□□□ 0.12
SMPD1-210ENST00000534405 EDDM3BP56851 147 aa15.77■□□□□ 0.12
SMPD1-210ENST00000534405 ZNF497Q6ZNH5 498 aa15.77■□□□□ 0.12
SMPD1-210ENST00000534405 C2orf91Q6ZV80 131 aa15.77■□□□□ 0.12
SMPD1-210ENST00000534405 OR2T6Q8NHC8 308 aa15.77■□□□□ 0.12
SMPD1-210ENST00000534405 RNASE7Q9H1E1 156 aaKnown RBP15.77■□□□□ 0.12
SMPD1-210ENST00000534405 SERTM2A0A1B0GWG4 89 aa15.77■□□□□ 0.11
SMPD1-210ENST00000534405 PSMB11A5LHX3 300 aa15.77■□□□□ 0.11
SMPD1-210ENST00000534405 CLDN14O95500 239 aa15.77■□□□□ 0.11
SMPD1-210ENST00000534405 NANOS1Q8WY41 292 aaKnown RBP15.77■□□□□ 0.11
SMPD1-210ENST00000534405 RTL8AQ9BWD3 113 aa15.77■□□□□ 0.11
SMPD1-210ENST00000534405 TMEM191AQ9H0A3 160 aa15.77■□□□□ 0.11
SMPD1-210ENST00000534405 ZNF331Q9NQX6 463 aaPredicted RBP15.77■□□□□ 0.11
SMPD1-210ENST00000534405 THYN1Q9P016 225 aa15.77■□□□□ 0.11
SMPD1-210ENST00000534405 TRGV5A0A0B4J1U4 118 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 HTR1DP28221 377 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 HOXA4Q00056 320 aaPredicted RBP15.76■□□□□ 0.11
SMPD1-210ENST00000534405 TBC1D28Q2M2D7 210 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 TMEM97Q5BJF2 176 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 OR2V2Q96R30 315 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 PMCHL2Q9BQD1 86 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 TRAPPC2LQ9UL33 140 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 DIDO1Q9BTC0 2240 aaKnown RBP15.76■□□□□ 0.11
SMPD1-210ENST00000534405 LOC400499M0QZD8 3231 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 TMEM189A5PLL7 270 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 ISLRO14498 428 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 GNG4P50150 75 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 CENPWQ5EE01 88 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 TCTEX1D4Q5JR98 221 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 PLA2G2CQ5R387 149 aa15.76■□□□□ 0.11
SMPD1-210ENST00000534405 F2RL2O00254 374 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 AREGP15514 252 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 ZNF16P17020 682 aaPredicted RBP15.75■□□□□ 0.11
SMPD1-210ENST00000534405 CEBPDP49716 269 aaPredicted RBP15.75■□□□□ 0.11
SMPD1-210ENST00000534405 FXYD3Q14802 87 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 HES3Q5TGS1 186 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 OR10AG1Q8NH19 301 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 FER1L6-AS2Q96M78 137 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 PRR14LQ5THK1 2151 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 H3BUT2 72 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 GCHFRP30047 84 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 RPS16P62249 146 aaKnown RBP15.75■□□□□ 0.11
SMPD1-210ENST00000534405 RAB31Q13636 194 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 KCNS2Q9ULS6 477 aa15.75■□□□□ 0.11
SMPD1-210ENST00000534405 PRRC2CQ9Y520 2896 aaKnown RBP15.75■□□□□ 0.11
SMPD1-210ENST00000534405 LRRC30A6NM36 301 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 WISP2O76076 250 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 P0C879 139 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 IGHV1-2P23083 117 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 OPRK1P41145 380 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 ZNF766Q5HY98 468 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 FAM53AQ6NSI3 398 aaPredicted RBP15.74■□□□□ 0.11
SMPD1-210ENST00000534405 DOLPP1Q86YN1 238 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 ZG16O60844 167 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 LYZL6O75951 148 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 CD300EQ496F6 205 aaPredicted RBP15.74■□□□□ 0.11
SMPD1-210ENST00000534405 URB1-AS1Q96HZ7 61 aa15.74■□□□□ 0.11
SMPD1-210ENST00000534405 A6NDN8 102 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 OR2J3O76001 311 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 HBZP02008 142 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 COX8AP10176 69 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 FAM162BQ5T6X4 162 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 MOB1BQ7L9L4 216 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 DRAM1Q8N682 238 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 VSTM2AQ8TAG5 236 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 MBD6Q96DN6 1003 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 MBNL3Q9NUK0 354 aaKnown RBP15.73■□□□□ 0.11
SMPD1-210ENST00000534405 SELENOKQ9Y6D0 94 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 A0A0G2JLM5 398 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 MPDU1O75352 247 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 GRPP07492 148 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 HIST1H1EP10412 219 aaKnown RBP15.73■□□□□ 0.11
SMPD1-210ENST00000534405 ZNF146Q15072 292 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 CLCF1Q9UBD9 225 aa15.73■□□□□ 0.11
SMPD1-210ENST00000534405 GAGE12HA6NDE8 117 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 HELTA6NFD8 242 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 PSPNO60542 156 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 RPL8P62917 257 aaKnown RBP15.72■□□□□ 0.11
SMPD1-210ENST00000534405 PQLC2Q6ZP29 291 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 BPIFA4PQ86YQ2 179 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.72■□□□□ 0.11
SMPD1-210ENST00000534405 POLDIP2Q9Y2S7 368 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 PCNX2A6NKB5 2137 aa15.72■□□□□ 0.11
SMPD1-210ENST00000534405 TEX48A0A1B0GUV7 120 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms