RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ATG12O94817 140 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 GABARAPO95166 117 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 IFNA17P01571 189 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 IGKV1-5P01602 117 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 TBPP20226 339 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 BMI1P35226 326 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 AKR1C2P52895 323 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 PRR20EP86478 221 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 PRR20CP86479 221 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 PRR20DP86480 221 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 PRR20BP86481 221 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 PRR20AP86496 221 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 WFDC3Q8IUB2 231 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 STPG3Q8N7X2 389 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 OR4D10Q8NGI6 311 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 TERB2Q8NHR7 220 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 ZFAND1Q8TCF1 268 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 C15orf40Q8WUR7 153 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 DNAH7Q8WXX0 4024 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 OR10C1Q96KK4 312 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 TP53RKQ96S44 253 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 COPZ2Q9P299 210 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 TP53TG1Q9Y2A0 90 aa6.61□□□□□ -1.35
COPB1-211ENST00000534234 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 IGKV3-7A0A075B6H7 116 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 IGHV3OR16-13A0A075B7E8 117 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 IGHV3-74A0A0B4J1X5 117 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 KIR2DL5BA0A0G2JN68 375 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 KIR2DL5BA0A0G2JPC4 375 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 RAB3DO95716 219 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 RPL35AP18077 110 aaKnown RBP6.6□□□□□ -1.35
COPB1-211ENST00000534234 ETV6P41212 452 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 NPBWR1P48145 328 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 TFPI2P48307 235 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 PPP5CP53041 499 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 CMC4P56277 68 aaPredicted RBP6.6□□□□□ -1.35
COPB1-211ENST00000534234 DEFB135Q30KP9 77 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 SP6Q3SY56 376 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 SCGB2B2Q4G0G5 96 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 KIR2DL5AQ8N109 375 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 SLC35G3Q8N808 338 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 TMEM229BQ8NBD8 167 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 DUSP18Q8NEJ0 188 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 KIR2DL5BQ8NHK3 375 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 GALNT14Q96FL9 552 aa6.6□□□□□ -1.35
COPB1-211ENST00000534234 A0A0J9YWU9 116 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 INS-IGF2F8WCM5 200 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 CTDSP2O14595 271 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 RGS5O15539 181 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 ST8SIA3O43173 380 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 CD74P04233 296 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 P0C879 139 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 SMIM18P0DKX4 95 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 SUB1P53999 127 aaKnown RBP eCLIP6.59□□□□□ -1.35
COPB1-211ENST00000534234 TAS2R19P59542 299 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 TNFRSF9Q07011 255 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 TRIM16LQ309B1 348 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 STEAP1BQ6NZ63 245 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 TOMM20LQ6UXN7 152 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 LYG2Q86SG7 212 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 CCDC71LQ8N9Z2 235 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 OR13C8Q8NGS7 320 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 MARCH1Q8TCQ1 289 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 RNF183Q96D59 192 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 RRNAD1Q96FB5 475 aaKnown RBP6.59□□□□□ -1.35
COPB1-211ENST00000534234 GINS3Q9BRX5 216 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 PDCD10Q9BUL8 212 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 C6orf62Q9GZU0 229 aaPredicted RBP6.59□□□□□ -1.35
COPB1-211ENST00000534234 MIXL1Q9H2W2 232 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 MAP6D1Q9H9H5 199 aa6.59□□□□□ -1.35
COPB1-211ENST00000534234 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.35
COPB1-211ENST00000534234 CXorf65A6NEN9 183 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 GABARAPH6UMI1 98 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 TMEM50AO95807 157 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 CD5P06127 495 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 UCP1P25874 307 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 EWSR1Q01844 656 aaKnown RBP eCLIP6.58□□□□□ -1.361e-10■■■■□ 21.5
COPB1-211ENST00000534234 PMS2P11Q13670 270 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 ZNF124Q15973 351 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 FAM90A2PQ658T7 463 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 PVRIGQ6DKI7 326 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 ZNF600Q6ZNG1 722 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 TCF24Q7RTU0 167 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 GBGT1Q8N5D6 347 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 RNASE11Q8TAA1 199 aaKnown RBP6.58□□□□□ -1.36
COPB1-211ENST00000534234 ENY2Q9NPA8 101 aa6.58□□□□□ -1.36
COPB1-211ENST00000534234 PUS1Q9Y606 427 aaKnown RBP eCLIP6.58□□□□□ -1.36
COPB1-211ENST00000534234 A0A0G2JRQ6 117 aa6.57□□□□□ -1.36
COPB1-211ENST00000534234 CORTO00230 105 aa6.57□□□□□ -1.36
COPB1-211ENST00000534234 B3GALNT1O75752 331 aa6.57□□□□□ -1.36
COPB1-211ENST00000534234 CDS2O95674 445 aa6.57□□□□□ -1.36
COPB1-211ENST00000534234 APOHP02749 345 aaPredicted RBP6.57□□□□□ -1.36
COPB1-211ENST00000534234 RNASE2P10153 161 aaKnown RBP6.57□□□□□ -1.36
COPB1-211ENST00000534234 HOXA1P49639 335 aaPredicted RBP6.57□□□□□ -1.36
COPB1-211ENST00000534234 MRPS10P82664 201 aaKnown RBP6.57□□□□□ -1.36
COPB1-211ENST00000534234 SSBP1Q04837 148 aaKnown RBP6.57□□□□□ -1.36
COPB1-211ENST00000534234 MLANAQ16655 118 aa6.57□□□□□ -1.36
COPB1-211ENST00000534234 Q6ZRM9 215 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms