RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 VSIRQ9H7M9 311 aa13.16□□□□□ -0.3
UBXN1-216ENST00000533908 IGHV3-66A0A0C4DH42 116 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 DFFBO76075 338 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 HRH1P35367 487 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 TAS2R46P59540 309 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 DEFB131AP59861 70 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 UBE2NLQ5JXB2 153 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 TMEM69Q5SWH9 247 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 LEMD1Q68G75 181 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 TBC1D26Q86UD7 250 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 SAMD12Q8N8I0 201 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 ZNF114Q8NC26 417 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
UBXN1-216ENST00000533908 TSC22D3Q99576 134 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 MFFQ9GZY8 342 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 MS4A6AQ9H2W1 248 aa13.15□□□□□ -0.3
UBXN1-216ENST00000533908 TMEM127O75204 238 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
UBXN1-216ENST00000533908 IFNA4P05014 189 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 GIG44P09565 113 aaPredicted RBP13.14□□□□□ -0.31
UBXN1-216ENST00000533908 PRSS3P35030 304 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 HSPE1P61604 102 aaKnown RBP13.14□□□□□ -0.31
UBXN1-216ENST00000533908 PRCDQ00LT1 54 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 SPINK9Q5DT21 86 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 CMTM3Q96MX0 182 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 ZFAND3Q9H8U3 227 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 FAM212BQ9NTI7 297 aaPredicted RBP13.14□□□□□ -0.31
UBXN1-216ENST00000533908 APLNQ9ULZ1 77 aa13.14□□□□□ -0.31
UBXN1-216ENST00000533908 KIAA1109Q2LD37 5005 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 A0A1B0GU03 582 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 GNG7O60262 68 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 ATP6V1G2O95670 118 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 TMEM187Q14656 261 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 H2BFWTQ7Z2G1 175 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 OR4A16Q8NH70 328 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 GPX8Q8TED1 209 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 C2CD4CQ8TF44 421 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 MRGPRFQ96AM1 343 aa13.13□□□□□ -0.31
UBXN1-216ENST00000533908 ST8SIA3O43173 380 aa13.12□□□□□ -0.31
UBXN1-216ENST00000533908 TMEM50AO95807 157 aa13.12□□□□□ -0.31
UBXN1-216ENST00000533908 RBMY1A1P0DJD3 496 aaKnown RBP13.12□□□□□ -0.31
UBXN1-216ENST00000533908 RBMY1CP0DJD4 496 aa13.12□□□□□ -0.31
UBXN1-216ENST00000533908 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
UBXN1-216ENST00000533908 RBMY1FQ15415 496 aaKnown RBP13.12□□□□□ -0.31
UBXN1-216ENST00000533908 Q8NAQ8 132 aa13.12□□□□□ -0.31
UBXN1-216ENST00000533908 PUS1Q9Y606 427 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBXN1-216ENST00000533908 EIF4EP06730 217 aaKnown RBP13.11□□□□□ -0.31
UBXN1-216ENST00000533908 LSM3P62310 102 aaKnown RBP13.11□□□□□ -0.31
UBXN1-216ENST00000533908 MLANAQ16655 118 aa13.11□□□□□ -0.31
UBXN1-216ENST00000533908 PVRIGQ6DKI7 326 aa13.11□□□□□ -0.31
UBXN1-216ENST00000533908 CROCCP3Q8IVE0 287 aa13.11□□□□□ -0.31
UBXN1-216ENST00000533908 MRPL36Q9P0J6 103 aaKnown RBP13.11□□□□□ -0.31
UBXN1-216ENST00000533908 AGRNO00468 2067 aa13.11□□□□□ -0.31
UBXN1-216ENST00000533908 IGLL5B9A064 214 aa13.1□□□□□ -0.31
UBXN1-216ENST00000533908 DNASE2O00115 360 aaPredicted RBP13.1□□□□□ -0.31
UBXN1-216ENST00000533908 IGKV1-5P01602 117 aa13.1□□□□□ -0.31
UBXN1-216ENST00000533908 TSPAN5P62079 268 aa13.1□□□□□ -0.31
UBXN1-216ENST00000533908 ERHP84090 104 aaKnown RBP13.1□□□□□ -0.31
UBXN1-216ENST00000533908 LPCAT3Q6P1A2 487 aa13.1□□□□□ -0.31
UBXN1-216ENST00000533908 GINS3Q9BRX5 216 aa13.1□□□□□ -0.31
UBXN1-216ENST00000533908 Q9H521 79 aa13.1□□□□□ -0.31
UBXN1-216ENST00000533908 TRAV2A0A0B4J234 112 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 A0A0B4J293 547 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 CD5P06127 495 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 P0C879 139 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 UCP3P55916 312 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 RPL11P62913 178 aaKnown RBP13.09□□□□□ -0.31
UBXN1-216ENST00000533908 ZNF600Q6ZNG1 722 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 DUSP18Q8NEJ0 188 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 YIPF6Q96EC8 236 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 HECTD4Q9Y4D8 3996 aa13.09□□□□□ -0.31
UBXN1-216ENST00000533908 IGHV4-28A0A0C4DH34 117 aa13.08□□□□□ -0.32
UBXN1-216ENST00000533908 NPBWR1P48145 328 aa13.08□□□□□ -0.32
UBXN1-216ENST00000533908 TCTAP57738 103 aa13.08□□□□□ -0.32
UBXN1-216ENST00000533908 TRPT1Q86TN4 253 aaKnown RBP13.08□□□□□ -0.32
UBXN1-216ENST00000533908 FNDC4Q9H6D8 234 aaPredicted RBP13.08□□□□□ -0.32
UBXN1-216ENST00000533908 RABAC1Q9UI14 185 aa13.08□□□□□ -0.32
UBXN1-216ENST00000533908 KNCNA6PVL3 124 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 INS-IGF2F8WCM5 200 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 K7EQG2 157 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 M0QYG6 137 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 RNASE2P10153 161 aaKnown RBP13.07□□□□□ -0.32
UBXN1-216ENST00000533908 PI3P19957 117 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 C4BPBP20851 252 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 HLA-DMBP28068 263 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 ETV6P41212 452 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 PPP5CP53041 499 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 KCTD21Q4G0X4 260 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 SNX29P2Q8IUI4 249 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 STHQ8IWL8 128 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 HRH4Q9H3N8 390 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 X6R8D5 127 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 DNAH6Q9C0G6 4158 aa13.07□□□□□ -0.32
UBXN1-216ENST00000533908 PCLOQ9Y6V0 5065 aa13.06□□□□□ -0.32
UBXN1-216ENST00000533908 ELOA3CA0A087WX78 387 aaPredicted RBP13.06□□□□□ -0.32
UBXN1-216ENST00000533908 NPPCP23582 126 aa13.06□□□□□ -0.32
UBXN1-216ENST00000533908 S100GP29377 79 aa13.06□□□□□ -0.32
UBXN1-216ENST00000533908 TP53RKQ96S44 253 aa13.06□□□□□ -0.32
UBXN1-216ENST00000533908 COMMD3Q9UBI1 195 aa13.06□□□□□ -0.32
UBXN1-216ENST00000533908 ZNF705EA8MWA4 302 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms