RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 MIEN1Q9BRT3 115 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 CACNG8Q8WXS5 425 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 RPUSD1Q9UJJ7 312 aaKnown RBP9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 TMSB15BA0A087X1C1 80 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 TRBV6-7A0A0A0MS04 114 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 UBE2CO00762 179 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 VENTXO95231 258 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 FOXG1P55316 489 aaPredicted RBP9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 C1QL2Q7Z5L3 287 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 RNF114Q9Y508 228 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 A0A087WWC5 75 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 C8orf88P0DMB2 117 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 SCGB1A1P11684 91 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 FGFBP3Q8TAT2 258 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 GPR82Q96P67 336 aa9.39□□□□□ -0.91
AMBRA1-211ENST00000533727 TWIST1Q15672 202 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 ZNF841Q6ZN19 808 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 EMP1P54849 157 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 C2orf68Q2NKX9 166 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 ZCCHC24Q8N2G6 241 aaKnown RBP9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 LYZL4Q96KX0 146 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 E7EQL1 145 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 CD5P06127 495 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 TMEM187Q14656 261 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 EFNB3Q15768 340 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 OR10AG1Q8NH19 301 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 PLPPR1Q8TBJ4 325 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 C14orf144Q96I85 54 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 CLDN16Q9Y5I7 305 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 A0A087WV48 116 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 NUDT3O95989 172 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 CBLN1P23435 193 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 UCP1P25874 307 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 MORN2Q502X0 79 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 GALNT14Q96FL9 552 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 IFI27L2Q9H2X8 130 aa9.38□□□□□ -0.91
AMBRA1-211ENST00000533727 MSMBP08118 114 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 SPANXN1Q5VSR9 72 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 LAMTOR2Q9Y2Q5 125 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 MSGN1A6NI15 193 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 SMIM13P0DJ93 91 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 VMO1Q7Z5L0 202 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 SHISA3A0PJX4 238 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 FAM90A9PA6NNJ1 464 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 CYP2G1PQ6ZSU1 146 aa9.37□□□□□ -0.91
AMBRA1-211ENST00000533727 NPFFO15130 113 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 IL4P05112 153 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 SRP19P09132 144 aaKnown RBP9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 CKS2P33552 79 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 WNT10AQ9GZT5 417 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 SOX21Q9Y651 276 aaPredicted RBP9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 STAG3L3P0CL85 134 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 PRNTQ86SH4 94 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 NPIPB3Q92617 1050 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 PSMG3Q9BT73 122 aaPredicted RBP9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 COL6A6A6NMZ7 2263 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 RNF222A6NCQ9 220 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 OR9G9P0C7N8 305 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 IGHV1-8P0DP01 117 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 SOSTQ9BQB4 213 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 RPRMQ9NS64 109 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 IL36RNQ9UBH0 155 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 F11RQ9Y624 299 aaKnown RBP9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 TTC28Q96AY4 2481 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 SAA2-SAA4A0A096LPE2 208 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 IGHV2-26A0A0B4J1V2 119 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 NPIPB6E9PJ23 425 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 H7C2G1 150 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 J3KRW8 73 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 UPK2O00526 184 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 SAA2P0DJI9 122 aaPredicted RBP9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 GPX4P36969 197 aaPredicted RBP9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 FAM89BQ8N5H3 189 aa9.36□□□□□ -0.91
AMBRA1-211ENST00000533727 ESPL1Q14674 2120 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 BPESC1Q9GZL8 116 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 FOXA2Q9Y261 457 aaPredicted RBP9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 PSMB11A5LHX3 300 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 REG1AP05451 166 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 TPTE2P1Q5T6R2 138 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 FAM71F2Q6NXP2 309 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 LURAP1LQ8IV03 231 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 SRSF12Q8WXF0 261 aaKnown RBP9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 TMEM190Q8WZ59 177 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 PRDM13Q9H4Q3 707 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 GBF1Q92538 1859 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 TIMM23O14925 209 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 CRXO43186 299 aaPredicted RBP9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 TNFSF13O75888 250 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 JOSD1Q15040 202 aaPredicted RBP9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 TRAV24A0A0B4J272 114 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 TMEM189A5PLL7 270 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 RRHO14718 337 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 MIC13Q5XKP0 118 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 C3orf56Q8N813 242 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 CLDND2Q8NHS1 167 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 DERL1Q9BUN8 251 aa9.35□□□□□ -0.91
AMBRA1-211ENST00000533727 IGKV1-9A0A0C4DH69 117 aa9.34□□□□□ -0.91
AMBRA1-211ENST00000533727 PVRIGQ6DKI7 326 aa9.34□□□□□ -0.91
AMBRA1-211ENST00000533727 PAQR4Q8N4S7 273 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms