RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 AREGP15514 252 aa17.43■□□□□ 0.38
AP004608.1-202ENST00000533390 SAA4P35542 130 aa17.43■□□□□ 0.38
AP004608.1-202ENST00000533390 PMS2P11Q13670 270 aa17.43■□□□□ 0.38
AP004608.1-202ENST00000533390 EBI3Q14213 229 aa17.43■□□□□ 0.38
AP004608.1-202ENST00000533390 ACY3Q96HD9 319 aa17.43■□□□□ 0.38
AP004608.1-202ENST00000533390 SRSF8Q9BRL6 282 aaKnown RBP17.43■□□□□ 0.38
AP004608.1-202ENST00000533390 TEX22C9J3V5 150 aa17.42■□□□□ 0.38
AP004608.1-202ENST00000533390 SRP19P09132 144 aaKnown RBP17.42■□□□□ 0.38
AP004608.1-202ENST00000533390 TMEM11P17152 192 aa17.42■□□□□ 0.38
AP004608.1-202ENST00000533390 BRS3P32247 399 aa17.42■□□□□ 0.38
AP004608.1-202ENST00000533390 C5orf64Q2M2E5 130 aa17.42■□□□□ 0.38
AP004608.1-202ENST00000533390 ABHD5Q8WTS1 349 aa17.42■□□□□ 0.38
AP004608.1-202ENST00000533390 NAV3Q8IVL0 2385 aa17.42■□□□□ 0.38
AP004608.1-202ENST00000533390 CORTO00230 105 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 NPFFO15130 113 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 DEFA4P12838 97 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 OR10J1P30954 320 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 SOHLH1Q5JUK2 328 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 IQCF2Q8IXL9 164 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 OR1P1Q8NH06 330 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 OR2T6Q8NHC8 308 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 FNDC4Q9H6D8 234 aaPredicted RBP17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 SLC45A2Q9UMX9 530 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 NCBP2LA6PVI3 153 aaKnown RBP17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 FAM106CPP0CH98 169 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 SSBP2P81877 361 aaPredicted RBP17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 PRR20EP86478 221 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 PRR20CP86479 221 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 PRR20DP86480 221 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 PRR20BP86481 221 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 PRR20AP86496 221 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 MISP3Q96FF7 219 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 VAX2Q9UIW0 290 aa17.41■□□□□ 0.38
AP004608.1-202ENST00000533390 UBR5O95071 2799 aaPredicted RBP17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 IGKV1OR2-108A0A075B7D4 117 aa17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 CENPVL3A0A0U1RRI6 287 aa17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 SLC25A16P16260 332 aa17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 TAGLN2P37802 199 aaKnown RBP17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 CLEC12BQ2HXU8 276 aa17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 PVRIGQ6DKI7 326 aa17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 Q8N6K4 173 aa17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 F11RQ9Y624 299 aaKnown RBP17.4■□□□□ 0.38
AP004608.1-202ENST00000533390 CEBPGP53567 150 aa17.39■□□□□ 0.38
AP004608.1-202ENST00000533390 FXYD3Q14802 87 aa17.39■□□□□ 0.38
AP004608.1-202ENST00000533390 SLC35E3Q7Z769 313 aa17.39■□□□□ 0.38
AP004608.1-202ENST00000533390 TMPRSS5Q9H3S3 457 aa17.39■□□□□ 0.38
AP004608.1-202ENST00000533390 MANBALQ9NQG1 85 aa17.39■□□□□ 0.38
AP004608.1-202ENST00000533390 PSMB3P49720 205 aa17.39■□□□□ 0.37
AP004608.1-202ENST00000533390 RHOBP62745 196 aa17.39■□□□□ 0.37
AP004608.1-202ENST00000533390 CLRN3Q8NCR9 226 aa17.39■□□□□ 0.37
AP004608.1-202ENST00000533390 SUN5Q8TC36 379 aa17.39■□□□□ 0.37
AP004608.1-202ENST00000533390 C22orf15Q8WYQ4 148 aa17.39■□□□□ 0.37
AP004608.1-202ENST00000533390 C1RLQ9NZP8 487 aa17.39■□□□□ 0.37
AP004608.1-202ENST00000533390 TSPAN9O75954 239 aa17.38■□□□□ 0.37
AP004608.1-202ENST00000533390 LINC00869P0C866 280 aa17.38■□□□□ 0.37
AP004608.1-202ENST00000533390 NPBWR1P48145 328 aa17.38■□□□□ 0.37
AP004608.1-202ENST00000533390 FBLN7Q53RD9 439 aa17.38■□□□□ 0.37
AP004608.1-202ENST00000533390 AJUBAQ96IF1 538 aa17.38■□□□□ 0.37
AP004608.1-202ENST00000533390 ABCA2Q9BZC7 2435 aa17.38■□□□□ 0.37
AP004608.1-202ENST00000533390 TACC2O95359 2948 aa17.38■□□□□ 0.37
AP004608.1-202ENST00000533390 MSMBP08118 114 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 FBP1P09467 338 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 MFAP2P55001 183 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 TMEM249Q2WGJ8 235 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 CYP2G1PQ6ZSU1 146 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 CYB561D1Q8N8Q1 229 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 NPIPB3Q92617 1050 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 FAM208BQ5VWN6 2430 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 MT-CO2P00403 227 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 COL8A1P27658 744 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 PIP4P2Q8N4L2 257 aa17.37■□□□□ 0.37
AP004608.1-202ENST00000533390 STAG3L2P0CL84 134 aa17.36■□□□□ 0.37
AP004608.1-202ENST00000533390 STAG3L3P0CL85 134 aa17.36■□□□□ 0.37
AP004608.1-202ENST00000533390 RND2P52198 227 aa17.36■□□□□ 0.37
AP004608.1-202ENST00000533390 ZNF562Q6V9R5 426 aa17.36■□□□□ 0.37
AP004608.1-202ENST00000533390 THAP8Q8NA92 274 aa17.36■□□□□ 0.37
AP004608.1-202ENST00000533390 SLC25A33Q9BSK2 321 aa17.36■□□□□ 0.37
AP004608.1-202ENST00000533390 TRAV40A0A0B4J280 105 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 IGHV1-69DA0A0B4J2H0 117 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 B4DSR2 109 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 CXorf1O96002 111 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 IGHV1-69P01742 117 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 IGHV3-48P01763 117 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 CRYGCP07315 174 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 MEF2BQ02080 365 aaPredicted RBP17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 C19orf35Q6ZS72 473 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 NANPQ8TBE9 248 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 C19orf24Q9BVV8 132 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 WNT10AQ9GZT5 417 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 TCRBV4S1A1TA0A5B7 111 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 M0R036 132 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 GATA2P23769 480 aaPredicted RBP17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 FAM120AOSQ5T036 256 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 OR1L6Q8NGR2 347 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 ARPC1AQ92747 370 aa17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 SEPSECSQ9HD40 501 aaKnown RBP17.35■□□□□ 0.37
AP004608.1-202ENST00000533390 DNASE2O00115 360 aaPredicted RBP17.34■□□□□ 0.37
AP004608.1-202ENST00000533390 CTRB1P17538 263 aa17.34■□□□□ 0.37
AP004608.1-202ENST00000533390 FAM78BQ5VT40 261 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms