RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 C11orf87Q6NUJ2 197 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 CLEC19AQ6UXS0 136 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 NRARPQ7Z6K4 114 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 DUSP18Q8NEJ0 188 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 OR1S1Q8NH92 325 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 COQ8AQ8NI60 647 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 MITD1Q8WV92 249 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 ENY2Q9NPA8 101 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 HSPB7Q9UBY9 170 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 CACFD1Q9UGQ2 172 aa9.19□□□□□ -0.94
SSBP3-214ENST00000533209 IGHV3-21A0A0B4J1V1 117 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 SEC14L6B5MCN3 397 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 I3L2K1 104 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 WIPF1O43516 503 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 ENKURQ8TC29 256 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 SCARB1Q8WTV0 552 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 MISP3Q96FF7 219 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 SEC22CQ9BRL7 303 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 RBKSQ9H477 322 aa9.18□□□□□ -0.94
SSBP3-214ENST00000533209 HEYLQ9NQ87 328 aaPredicted RBP9.18□□□□□ -0.94
SSBP3-214ENST00000533209 MPTX1A8MV57 137 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 F8W735 103 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-214ENST00000533209 CLEC3BP05452 202 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 ARL3P36405 182 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 HTR2BP41595 481 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 SUB1P53999 127 aaKnown RBP eCLIP9.17□□□□□ -0.94
SSBP3-214ENST00000533209 SYNJ2BPP57105 145 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 DEFA1P59665 94 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 DEFA3P59666 94 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 RPEL1Q2QD12 228 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 C9orf66Q5T8R8 295 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 ACSM6Q6P461 480 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 DTD1Q8TEA8 209 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 ZNF431Q8TF32 576 aaPredicted RBP9.17□□□□□ -0.94
SSBP3-214ENST00000533209 GPR61Q9BZJ8 451 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 C21orf62Q9NYP8 219 aa9.17□□□□□ -0.94
SSBP3-214ENST00000533209 FAM90A26D6RGX4 464 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 GGCTO75223 188 aaKnown RBP9.16□□□□□ -0.94
SSBP3-214ENST00000533209 OR2C1O95371 312 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 MT-CO2P00403 227 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 IFNA21P01568 189 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 IL5P05113 134 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 GPR183P32249 361 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 EGFEM1PQ0D2K5 195 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 C2orf83Q53S99 150 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 IL34Q6ZMJ4 242 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 PINX1Q96BK5 328 aaKnown RBP9.16□□□□□ -0.94
SSBP3-214ENST00000533209 ATP6V0BQ99437 205 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 HIPK2Q9H2X6 1198 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 ZC4H2Q9NQZ6 224 aa9.16□□□□□ -0.94
SSBP3-214ENST00000533209 OR2T8A6NH00 312 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 TGOLN2O43493 480 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 IGHV3-48P01763 117 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 FCGR2BP31994 310 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-214ENST00000533209 KRTAP10-11P60412 298 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 DEFA6Q01524 100 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 GPHB5Q86YW7 130 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 C12orf45Q8N5I9 185 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-214ENST00000533209 SLC24A4Q8NFF2 622 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 OR4D5Q8NGN0 318 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 OR9G4Q8NGQ1 327 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 BSCL2Q96G97 398 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-214ENST00000533209 OR10C1Q96KK4 312 aa9.15□□□□□ -0.94
SSBP3-214ENST00000533209 FNDC4Q9H6D8 234 aaPredicted RBP9.15□□□□□ -0.94
SSBP3-214ENST00000533209 INMT-MINDY4F8WBC2 141 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 CORTO00230 105 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 SAP30O75446 220 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 SPNP16150 400 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 NPY1RP25929 384 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 ADMP35318 185 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 INSL3P51460 131 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 MFAP4P55083 255 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 ID3Q02535 119 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 MLANAQ16655 118 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 TATDN3Q17R31 274 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 Q56UQ5 140 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 SPSB3Q6PJ21 355 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 PLET1Q6UQ28 207 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 UBAC2Q8NBM4 344 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 TXN2Q99757 166 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 MARVELD1Q9BSK0 173 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 CHRDL1Q9BU40 450 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 ELOVL1Q9BW60 279 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 MAGT1Q9H0U3 335 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 U3KQ87 197 aa9.14□□□□□ -0.95
SSBP3-214ENST00000533209 IGHV3-35A0A0C4DH35 117 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 LGALS9O00182 355 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 CCSO14618 274 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 SYNGR2O43760 224 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 MED6O75586 246 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 IFNA10P01566 189 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 PRB2P02812 416 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-214ENST00000533209 CSN3P07498 182 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 CTSGP08311 255 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 IAPPP10997 89 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 IAH1Q2TAA2 248 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-214ENST00000533209 FAM106AQ4KMX7 169 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 ADAMTSL5Q6ZMM2 481 aa9.13□□□□□ -0.95
SSBP3-214ENST00000533209 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms