RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 SDHCQ99643 169 aaPredicted RBP13.36□□□□□ -0.27
SMG1-203ENST00000532700 SRSF8Q9BRL6 282 aaKnown RBP13.36□□□□□ -0.27
SMG1-203ENST00000532700 TMEM222Q9H0R3 208 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 ZMAT4Q9H898 229 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 TMEM14BQ9NUH8 114 aa13.36□□□□□ -0.27
SMG1-203ENST00000532700 F11RQ9Y624 299 aaKnown RBP13.36□□□□□ -0.27
SMG1-203ENST00000532700 OR2T8A6NH00 312 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 C15orf61A6NNL5 157 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 C3orf84H3BNL1 204 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 UCP1P25874 307 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 SP6Q3SY56 376 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 SLC25A24Q6NUK1 477 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 OR4A16Q8NH70 328 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 CXorf58Q96LI9 332 aa13.35□□□□□ -0.27
SMG1-203ENST00000532700 C7orf50Q9BRJ6 194 aaKnown RBP13.35□□□□□ -0.27
SMG1-203ENST00000532700 TGOLN2O43493 480 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 SCAF4O95104 1147 aaKnown RBP13.34□□□□□ -0.27
SMG1-203ENST00000532700 OR5AC1P0C628 307 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 IL7P13232 177 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 AKR1C4P17516 323 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 AKR1C2P52895 323 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 SPINK9Q5DT21 86 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 ZFAND6Q6FIF0 208 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 HSD17B13Q7Z5P4 300 aaPredicted RBP13.34□□□□□ -0.27
SMG1-203ENST00000532700 OR5B3Q8NH48 314 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 SCARB1Q8WTV0 552 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 LSM10Q969L4 123 aaKnown RBP13.34□□□□□ -0.27
SMG1-203ENST00000532700 RRNAD1Q96FB5 475 aaKnown RBP13.34□□□□□ -0.27
SMG1-203ENST00000532700 ZNF436Q9C0F3 470 aaPredicted RBP13.34□□□□□ -0.27
SMG1-203ENST00000532700 HIPK2Q9H2X6 1198 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 TUBA4BQ9H853 241 aa13.34□□□□□ -0.27
SMG1-203ENST00000532700 CDS2O95674 445 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 IGKV1-5P01602 117 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 IGHV3-48P01763 117 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 C8orf88P0DMB2 117 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 ANXA3P12429 323 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 RBMS2Q15434 407 aaKnown RBP13.33□□□□□ -0.28
SMG1-203ENST00000532700 RNASE11Q8TAA1 199 aaKnown RBP13.33□□□□□ -0.28
SMG1-203ENST00000532700 VN1R17PQ8TDU5 208 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 GLYATL2Q8WU03 294 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 GALNT14Q96FL9 552 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 CCDC32Q9BV29 185 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 SRD5A3Q9H8P0 318 aa13.33□□□□□ -0.28
SMG1-203ENST00000532700 TECRQ9NZ01 308 aaKnown RBP13.33□□□□□ -0.28
SMG1-203ENST00000532700 TENM2Q9NT68 2774 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 PIGBOS1A0A0B4J2F0 54 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 LINC00854A0A1B0GVQ3 168 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 OR11H12B2RN74 326 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 ZNF207O43670 478 aaKnown RBP13.32□□□□□ -0.28
SMG1-203ENST00000532700 P0C879 139 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 FAM106AQ4KMX7 169 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 PLET1Q6UQ28 207 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 TMED4Q7Z7H5 227 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 FAM219AQ8IW50 185 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 TMEM190Q8WZ59 177 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 RBPMSQ93062 196 aaKnown RBP13.32□□□□□ -0.28
SMG1-203ENST00000532700 TMEM230Q96A57 120 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 TMEM56Q96MV1 263 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
SMG1-203ENST00000532700 A0A0G2JRQ6 117 aa13.31□□□□□ -0.28
SMG1-203ENST00000532700 CYB5BO43169 146 aa13.31□□□□□ -0.28
SMG1-203ENST00000532700 TMEM128Q5BJH2 165 aa13.31□□□□□ -0.28
SMG1-203ENST00000532700 IL22RA2Q969J5 263 aa13.31□□□□□ -0.28
SMG1-203ENST00000532700 WDR12Q9GZL7 423 aaKnown RBP13.31□□□□□ -0.28
SMG1-203ENST00000532700 TMEM56-RWDD3S4R434 201 aa13.31□□□□□ -0.28
SMG1-203ENST00000532700 RYR2Q92736 4967 aa13.31□□□□□ -0.28
SMG1-203ENST00000532700 CCR6P51684 374 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 SRPXP78539 464 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 TMEM187Q14656 261 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 TMEM268Q5VZI3 342 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 SELENOHQ8IZQ5 122 aaKnown RBP13.3□□□□□ -0.28
SMG1-203ENST00000532700 OR2C3Q8N628 320 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 UBAC2Q8NBM4 344 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 LYSTQ99698 3801 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 C21orf62Q9NYP8 219 aa13.3□□□□□ -0.28
SMG1-203ENST00000532700 A0A0B4J293 547 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 I3L2K1 104 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 NDUFB6O95139 128 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 CTSGP08311 255 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 LYL1P12980 280 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 HSPE1P61604 102 aaKnown RBP13.29□□□□□ -0.28
SMG1-203ENST00000532700 PRCDQ00LT1 54 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 ZNF846Q147U1 533 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 CENPSQ8N2Z9 138 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 PDCD10Q9BUL8 212 aa13.29□□□□□ -0.28
SMG1-203ENST00000532700 UBE2MP61081 183 aaKnown RBP13.28□□□□□ -0.28
SMG1-203ENST00000532700 SUPT4H1P63272 117 aaKnown RBP13.28□□□□□ -0.28
SMG1-203ENST00000532700 LGI3Q8N145 548 aa13.28□□□□□ -0.28
SMG1-203ENST00000532700 LHFPL5Q8TAF8 219 aa13.28□□□□□ -0.28
SMG1-203ENST00000532700 MISP3Q96FF7 219 aa13.28□□□□□ -0.28
SMG1-203ENST00000532700 BSCL2Q96G97 398 aaPredicted RBP13.28□□□□□ -0.28
SMG1-203ENST00000532700 THYN1Q9P016 225 aa13.28□□□□□ -0.28
SMG1-203ENST00000532700 SACSQ9NZJ4 4579 aa13.27□□□□□ -0.28
SMG1-203ENST00000532700 LYRM1O43325 122 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 VAMP1P23763 118 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 Q56UQ5 140 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 OR52B4Q8NGK2 314 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 OR1L6Q8NGR2 347 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 OR1P1Q8NH06 330 aa13.27□□□□□ -0.29
SMG1-203ENST00000532700 C20orf24Q9BUV8 137 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms