RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 OR4C16Q8NGL9 310 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 MCFD2Q8NI22 146 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 PINX1Q96BK5 328 aaKnown RBP12.95□□□□□ -0.34
PHRF1-204ENST00000532550 CITED4Q96RK1 184 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 TXN2Q99757 166 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 PRRT1Q99946 306 aa12.95□□□□□ -0.34
PHRF1-204ENST00000532550 RTBDNQ9BSG5 229 aaPredicted RBP12.95□□□□□ -0.34
PHRF1-204ENST00000532550 DAZ1Q9NQZ3 744 aaKnown RBP12.95□□□□□ -0.34
PHRF1-204ENST00000532550 F8W735 103 aaPredicted RBP12.94□□□□□ -0.34
PHRF1-204ENST00000532550 I3L2K1 104 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 K7EMT4 169 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 ST8SIA3O43173 380 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 GSTZ1O43708 216 aaPredicted RBP12.94□□□□□ -0.34
PHRF1-204ENST00000532550 CDS2O95674 445 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 MT-CO2P00403 227 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 P0C879 139 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 ADMP35318 185 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 ETV6P41212 452 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 SUB1P53999 127 aaKnown RBP eCLIP12.94□□□□□ -0.34
PHRF1-204ENST00000532550 DHODHQ02127 395 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 RELQ04864 619 aaPredicted RBP12.94□□□□□ -0.34
PHRF1-204ENST00000532550 LAMTOR1Q6IAA8 161 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 OR51S1Q8NGJ8 323 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 MUC7Q8TAX7 377 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 TMEM222Q9H0R3 208 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 C5orf66Q9H5L9 145 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 SRD5A3Q9H8P0 318 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 ENY2Q9NPA8 101 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 GPR132Q9UNW8 380 aa12.94□□□□□ -0.34
PHRF1-204ENST00000532550 NBEAL2Q6ZNJ1 2754 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 ANKRD20A5PA0PJZ0 165 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 CCDC160A6NGH7 325 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 OR5AC1P0C628 307 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 FCGR2BP31994 310 aaPredicted RBP12.93□□□□□ -0.34
PHRF1-204ENST00000532550 LINC00322Q6ZN03 302 aaPredicted RBP12.93□□□□□ -0.34
PHRF1-204ENST00000532550 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 SCGB3A2Q96PL1 93 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 NAA60Q9H7X0 242 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 SCP2D1Q9UJQ7 156 aa12.93□□□□□ -0.34
PHRF1-204ENST00000532550 INS-IGF2F8WCM5 200 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 GNG7O60262 68 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 YIF1AO95070 293 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 IGHV3-48P01763 117 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 HOXA1P49639 335 aaPredicted RBP12.92□□□□□ -0.34
PHRF1-204ENST00000532550 FAM219AQ8IW50 185 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 DUSP18Q8NEJ0 188 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 SOSTQ9BQB4 213 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 NXF2Q9GZY0 626 aaKnown RBP12.92□□□□□ -0.34
PHRF1-204ENST00000532550 WFDC10AQ9H1F0 79 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.92□□□□□ -0.34
PHRF1-204ENST00000532550 KCNIP3Q9Y2W7 256 aa12.92□□□□□ -0.34
PHRF1-204ENST00000532550 IGHV3OR16-8A0A075B7F1 116 aa12.91□□□□□ -0.34
PHRF1-204ENST00000532550 RBMY1BA6NDE4 496 aaKnown RBP12.91□□□□□ -0.34
PHRF1-204ENST00000532550 RBMY1EA6NEQ0 496 aaKnown RBP12.91□□□□□ -0.34
PHRF1-204ENST00000532550 C15orf62A8K5M9 175 aa12.91□□□□□ -0.34
PHRF1-204ENST00000532550 ZNF207O43670 478 aaKnown RBP12.91□□□□□ -0.34
PHRF1-204ENST00000532550 RBMY1DP0C7P1 496 aaKnown RBP12.91□□□□□ -0.34
PHRF1-204ENST00000532550 NPBWR1P48145 328 aa12.91□□□□□ -0.34
PHRF1-204ENST00000532550 SELENOHQ8IZQ5 122 aaKnown RBP12.91□□□□□ -0.34
PHRF1-204ENST00000532550 RBPMSQ93062 196 aaKnown RBP12.91□□□□□ -0.34
PHRF1-204ENST00000532550 SPAG8Q99932 426 aaPredicted RBP12.91□□□□□ -0.34
PHRF1-204ENST00000532550 MCUBQ9NWR8 336 aa12.91□□□□□ -0.34
PHRF1-204ENST00000532550 A0A0G2JRQ6 117 aa12.9□□□□□ -0.34
PHRF1-204ENST00000532550 CRYM-AS1A6NIL9 109 aa12.9□□□□□ -0.34
PHRF1-204ENST00000532550 LYL1P12980 280 aa12.9□□□□□ -0.34
PHRF1-204ENST00000532550 Q6ZRM9 215 aa12.9□□□□□ -0.34
PHRF1-204ENST00000532550 HIPK2Q9H2X6 1198 aa12.9□□□□□ -0.34
PHRF1-204ENST00000532550 TRAV14DV4A0A0A6YYC5 116 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 CORTO00230 105 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 TSPAN4O14817 238 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 S100A5P33763 92 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 SPCS3P61009 180 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 PYDC2Q56P42 97 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 TMEM268Q5VZI3 342 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 OR52E5Q8NH55 327 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 LHFPL5Q8TAF8 219 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 SMPXQ9UHP9 88 aa12.89□□□□□ -0.35
PHRF1-204ENST00000532550 KMT2CQ8NEZ4 4911 aaKnown RBP12.89□□□□□ -0.35
PHRF1-204ENST00000532550 IGHV7-4-1A0A0J9YVY3 117 aa12.88□□□□□ -0.35
PHRF1-204ENST00000532550 RNASE2P10153 161 aaKnown RBP12.88□□□□□ -0.35
PHRF1-204ENST00000532550 FAUP35544 74 aaKnown RBP12.88□□□□□ -0.35
PHRF1-204ENST00000532550 TMEM116Q8NCL8 245 aa12.88□□□□□ -0.35
PHRF1-204ENST00000532550 GPR146Q96CH1 333 aa12.88□□□□□ -0.35
PHRF1-204ENST00000532550 EDA2RQ9HAV5 297 aa12.88□□□□□ -0.35
PHRF1-204ENST00000532550 HEYLQ9NQ87 328 aaPredicted RBP12.88□□□□□ -0.35
PHRF1-204ENST00000532550 TMEM56-RWDD3S4R434 201 aa12.88□□□□□ -0.35
PHRF1-204ENST00000532550 LOC102724200A0A096LPH7 203 aaPredicted RBP12.87□□□□□ -0.35
PHRF1-204ENST00000532550 TMEM50AO95807 157 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 AKR1C4P17516 323 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 AP3S2P59780 193 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 GALNT14Q96FL9 552 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 OR10C1Q96KK4 312 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 GINS3Q9BRX5 216 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 RHPN1-AS1Q9BWJ2 59 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 RETNQ9HD89 108 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 CACNG5Q9UF02 275 aa12.87□□□□□ -0.35
PHRF1-204ENST00000532550 OR4C46A6NHA9 309 aa12.86□□□□□ -0.35
PHRF1-204ENST00000532550 CHEK1O14757 476 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms