RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 IL6RP08887 468 aaPredicted RBP12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 ZNF843Q8N446 348 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 ELOA3CA0A087WX78 387 aaPredicted RBP12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 IGHV1-69DA0A0B4J2H0 117 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 C20orf202A1L168 122 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 IGHV1-69P01742 117 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 TFF3Q07654 80 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 SPANXN1Q5VSR9 72 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 AP1S3Q96PC3 154 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 TBL2Q9Y4P3 447 aaKnown RBP12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 RAB9AP51151 201 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 CD69Q07108 199 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 PRSS8Q16651 343 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 PDE6DO43924 150 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 LOXP28300 417 aaPredicted RBP12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 C5orf64Q2M2E5 130 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 ANKRD11Q6UB99 2663 aaPredicted RBP12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 H0YJW9 148 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 GPX1P07203 203 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 CCKARP32238 428 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 QRFPP83859 136 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 TMEM177Q53S58 311 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 OR10G8Q8NGN5 311 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 AQP10Q96PS8 301 aa12.87□□□□□ -0.35
PPFIA1-222ENST00000532504 NAV2Q8IVL1 2488 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 HIVEP2P31629 2446 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 SCO1O75880 301 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 UBE2E1P51965 193 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 KIR3DL3Q8N743 410 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 OR2D3Q8NGH3 330 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 NAT8Q9UHE5 227 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 KIAA1549LQ6ZVL6 1849 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 IGHV4-30-2A0A087WSY4 118 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 MYOD1P15172 320 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 CFHR2P36980 270 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 ZNF383Q8NA42 475 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 SRD5A3Q9H8P0 318 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 RGS13O14921 159 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 NDUFB4O95168 129 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 NHLRC2Q8NBF2 726 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 PCNTO95613 3336 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 CX3CL1P78423 397 aa12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 RNASEH2CQ8TDP1 164 aaKnown RBP12.86□□□□□ -0.35
PPFIA1-222ENST00000532504 TRAV3A0A0B4J244 114 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 LINC00473A8K010 186 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 NAT1P18440 290 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 RAB5AP20339 215 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 PSG9Q00887 426 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 C15orf32Q32M92 178 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 UQCC3Q6UW78 93 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 FA2HQ7L5A8 372 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 CEP192Q8TEP8 1941 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 IGHV4-61A0A0C4DH41 118 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 CD55P08174 381 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 SPRNQ5BIV9 151 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 FOXI3A8MTJ6 420 aaPredicted RBP12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 CLDN34H7C241 214 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 IGHV4-39P01824 125 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 ICAM4Q14773 271 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 DGAT2L7PQ6IED9 249 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 MRPL54Q6P161 138 aaKnown RBP12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 GOLT1AQ6ZVE7 132 aa12.85□□□□□ -0.35
PPFIA1-222ENST00000532504 SAP30O75446 220 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 HIST2H2BCQ6DN03 193 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 FAM53AQ6NSI3 398 aaPredicted RBP12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 C12orf54Q6X4T0 127 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 PRCDQ00LT1 54 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 C2CD4CQ8TF44 421 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 TMEM37Q8WXS4 190 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 NPCDR1Q9BY65 106 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 BET1LQ9NYM9 111 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 HSPB7Q9UBY9 170 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 CSN3P07498 182 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 FHITP49789 147 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 ASCL4Q6XD76 172 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 TRAPPC1Q9Y5R8 145 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 FCN1O00602 326 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 BCL2P10415 239 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 ZNF585BQ52M93 769 aa12.84□□□□□ -0.35
PPFIA1-222ENST00000532504 FREM1Q5H8C1 2179 aa12.83□□□□□ -0.35
PPFIA1-222ENST00000532504 C19orf84I3L1E1 186 aa12.83□□□□□ -0.35
PPFIA1-222ENST00000532504 KLHL30-AS1Q8NEE0 82 aa12.83□□□□□ -0.35
PPFIA1-222ENST00000532504 IGKV1-16P04430 117 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 LEMD1Q68G75 181 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 OR11H4Q8NGC9 324 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 C18orf12Q96KH6 178 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 NUTF2P61970 127 aaKnown RBP12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 CD81P60033 236 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 DPPA3Q6W0C5 159 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 SPOCK3Q9BQ16 436 aa12.83□□□□□ -0.36
PPFIA1-222ENST00000532504 EMP1P54849 157 aa12.82□□□□□ -0.36
PPFIA1-222ENST00000532504 SRSF7Q16629 238 aaKnown RBP eCLIP12.82□□□□□ -0.36
PPFIA1-222ENST00000532504 LCNL1Q6ZST4 164 aa12.82□□□□□ -0.36
PPFIA1-222ENST00000532504 DENND4AQ7Z401 1863 aa12.82□□□□□ -0.36
PPFIA1-222ENST00000532504 CRYBB3P26998 211 aa12.82□□□□□ -0.36
PPFIA1-222ENST00000532504 TRAV14DV4A0A0A6YYC5 116 aa12.82□□□□□ -0.36
PPFIA1-222ENST00000532504 TMEM189A5PLL7 270 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms