RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SCTP09683 121 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 KRTAP1-4P0C5Y4 121 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 GZMBP10144 247 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 PSMB8P28062 276 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 SRIP30626 198 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 AQP4P55087 323 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 DEFA3P59666 94 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 CKS1BP61024 79 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 MEF2BQ02080 365 aaPredicted RBP2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 RTL8BQ17RB0 113 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 FKBP1CQ5VVH2 108 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 C1orf140Q5VVS0 124 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 ZNF695Q8IW36 515 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 Q8NAQ8 132 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 OR8J3Q8NGG0 315 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 OR5C1Q8NGR4 320 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 TERB2Q8NHR7 220 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 SCRT1Q9BWW7 348 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 TXNL4BQ9NX01 149 aaKnown RBP2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 NCAPD3P42695 1498 aa2.64□□□□□ -1.99
AC055878.1-201ENST00000531858 GTF3C1Q12789 2109 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 KIAA1671Q9BY89 1806 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 TSPOAP1O95153 1857 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 SPATA31E1Q6ZUB1 1445 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 IGLV4-60A0A075B6I1 120 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 A0A087X0T9 212 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 TRAV5A0A0B4J249 113 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 IGKV6D-41A0A0C4DH26 115 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 LOC102725191A0A1B0GVB3 256 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 C19orf71A6NCJ1 209 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 RFPL4AA6NLU0 287 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 RFPL4AL1F8VTS6 287 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 TXNDC9O14530 226 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 OVOL1O14753 267 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 SOD1P00441 154 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 COX4I1P13073 169 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 CCL5P13501 91 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 RPL7P18124 248 aaKnown RBP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 RPS3P23396 243 aaKnown RBP eCLIP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 CA5AP35218 305 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 SRP14P37108 136 aaKnown RBP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 EIF5AP63241 154 aaKnown RBP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 EIF3IQ13347 325 aaKnown RBP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 KPRPQ5T749 579 aaPredicted RBP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 ZNF705AQ6ZN79 300 aaPredicted RBP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 MIR17HGQ75NE6 70 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 PACRGLQ8N7B6 248 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 TMEM229BQ8NBD8 167 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 SCGB3A1Q96QR1 104 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 SLC25A21Q9BQT8 299 aaPredicted RBP2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 YIPF3Q9GZM5 350 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 FAM215AQ9Y5M1 114 aa2.63□□□□□ -1.99
AC055878.1-201ENST00000531858 REREQ9P2R6 1566 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 TECPR2O15040 1411 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 A0A0D9SEW6 157 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 A0A1W2PQD3 144 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 ZNF860A6NHJ4 632 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 C17orf98A8MV24 154 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 GGTLC3B5MD39 225 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 K7EP13 123 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 CREBL2O60519 120 aaPredicted RBP2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 WISP3O95389 354 aaPredicted RBP2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 MPC1LP0DKB6 136 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 P0DMU3 169 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 FAM231AP0DMU4 169 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 FAM231CP0DMU5 169 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 NFYBP25208 207 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 KLF3P57682 345 aaPredicted RBP2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 LHFPL1Q86WI0 220 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 HIST3H2BBQ8N257 126 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 TCEAL2Q9H3H9 227 aaPredicted RBP2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 C16orf95Q9H693 158 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 LRP4O75096 1905 aa2.62□□□□□ -1.99
AC055878.1-201ENST00000531858 COL18A1P39060 1754 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 YLPM1P49750 1951 aaKnown RBP2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 TCF20Q9UGU0 1960 aaKnown RBP2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 LTBP4Q8N2S1 1624 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 TRGV10A0A0A0MS01 117 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 M0R378 163 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 TP53I11O14683 189 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 PSCAO43653 123 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 CST8O60676 142 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 TCL1BO95988 128 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 HLA-DMBP28068 263 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 UBE2BP63146 152 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 ZNF660Q6AZW8 331 aaPredicted RBP2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 RPL13AP3Q6NVV1 102 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 Q6P435 159 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 C22orf39Q6P5X5 142 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 C2orf91Q6ZV80 131 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 OR8I2Q8N0Y5 310 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 OR4C16Q8NGL9 310 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 OR8D4Q8NGM9 314 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 DNAJC9Q8WXX5 260 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 TTTY13Q9BZ97 58 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 OR8D2Q9GZM6 311 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 OSTCQ9NRP0 149 aa2.61□□□□□ -1.99
AC055878.1-201ENST00000531858 HSPB8Q9UJY1 196 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms