RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 GNG5P63218 68 aa7.07□□□□□ -1.28
CTNND1-227ENST00000530748 TBL2Q9Y4P3 447 aaKnown RBP7.07□□□□□ -1.28
CTNND1-227ENST00000530748 C19orf67A6NJJ6 358 aa7.07□□□□□ -1.28
CTNND1-227ENST00000530748 DNAL4O96015 105 aa7.07□□□□□ -1.28
CTNND1-227ENST00000530748 BTCP35070 178 aa7.07□□□□□ -1.28
CTNND1-227ENST00000530748 ASCL2Q99929 193 aa7.07□□□□□ -1.28
CTNND1-227ENST00000530748 IGKV1D-13A0A0B4J2D9 117 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 IGHV1-46P01743 117 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 OR9G9P0C7N8 305 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 IGKV1-13P0DP09 117 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 PRCDQ00LT1 54 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 C18orf15Q96N68 181 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 DMRTA2Q96SC8 542 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 RBMY1BA6NDE4 496 aaKnown RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 RBMY1EA6NEQ0 496 aaKnown RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 RBMY1DP0C7P1 496 aaKnown RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 RBMY1A1P0DJD3 496 aaKnown RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 RBMY1CP0DJD4 496 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 IL18BPO95998 194 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 IGHV3-11P01762 117 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 CLPSP04118 112 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 FAM71F2Q6NXP2 309 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 LINC00518Q8N0U6 118 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 ORMDL3Q8N138 153 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 IMMP2LQ96T52 175 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 MRPL16Q9NX20 251 aaKnown RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 TFF1P04155 84 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 CRYGSP22914 178 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 TIMP3P35625 211 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 VMO1Q7Z5L0 202 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 ST20Q9HBF5 79 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 BEX4Q9NWD9 120 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 PEF1Q9UBV8 284 aaKnown RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 NDUFA3O95167 84 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 GATA2P23769 480 aaPredicted RBP7.06□□□□□ -1.28
CTNND1-227ENST00000530748 FAM89BQ8N5H3 189 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 TMEM190Q8WZ59 177 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 RNF125Q96EQ8 232 aa7.06□□□□□ -1.28
CTNND1-227ENST00000530748 IGKV1-9A0A0C4DH69 117 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 NEUROG1Q92886 237 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 VGLL1Q99990 258 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 C1QTNF9BB2RNN3 333 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 HTN3P15516 51 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-227ENST00000530748 GGNQ86UU5 652 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 RNF126Q9BV68 326 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 PLSCR4Q9NRQ2 329 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 EPDR1Q9UM22 224 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 ZNF257Q9Y2Q1 563 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TRGV2A0A075B6R0 118 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TSPAN13O95857 204 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 ADMP35318 185 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 ZNF600Q6ZNG1 722 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 NEUROG3Q9Y4Z2 214 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 URB1O60287 2271 aaKnown RBP7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TRAV8-6A0A0B4J262 113 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-227ENST00000530748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.05□□□□□ -1.28
CTNND1-227ENST00000530748 WNT2P09544 360 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 EMP1P54849 157 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 RPL23P62829 140 aaKnown RBP7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TTC32Q5I0X7 151 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 PSMG4Q5JS54 123 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TMEM42Q69YG0 159 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 OR5AN1Q8NGI8 311 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TRAV21A0A0B4J279 112 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 MUC21A0A0G2JKD1 596 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 MUC21A0A140T8X8 626 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 FABP5P3A8MUU1 101 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 A8MXK9 166 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 CD7P09564 240 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 TDGF1P13385 188 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 MUC21Q5SSG8 566 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 CYB5R2Q6BCY4 276 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 SIGLEC15Q6ZMC9 328 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 BEND2Q8NDZ0 799 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 C8orf46Q8TAG6 207 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 FGFBP3Q8TAT2 258 aa7.05□□□□□ -1.28
CTNND1-227ENST00000530748 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 HOXA3O43365 443 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-227ENST00000530748 MALP21145 153 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 CNTFRP26992 372 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 DUTP33316 252 aaKnown RBP7.04□□□□□ -1.28
CTNND1-227ENST00000530748 CCL20P78556 96 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 RHOGP84095 191 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 NABP1Q96AH0 204 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 GFI1Q99684 422 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 F8VVB4 439 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 F8VWA3 439 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 PRB3Q04118 309 aaPredicted RBP7.04□□□□□ -1.28
CTNND1-227ENST00000530748 OVOL1O14753 267 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 TTC9CQ8N5M4 171 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 IGHV2-26A0A0B4J1V2 119 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 GTSCR1Q86UQ5 136 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 C3orf56Q8N813 242 aa7.04□□□□□ -1.28
CTNND1-227ENST00000530748 CHD5Q8TDI0 1954 aa7.03□□□□□ -1.28
CTNND1-227ENST00000530748 IGHV3OR16-8A0A075B7F1 116 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms