RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 LYG2Q86SG7 212 aa15.49■□□□□ 0.07
SMPD1-204ENST00000530395 ARRDC1Q8N5I2 433 aa15.49■□□□□ 0.07
SMPD1-204ENST00000530395 OR10C1Q96KK4 312 aa15.49■□□□□ 0.07
SMPD1-204ENST00000530395 RNF2Q99496 336 aa15.49■□□□□ 0.07
SMPD1-204ENST00000530395 NXF2Q9GZY0 626 aaKnown RBP15.49■□□□□ 0.07
SMPD1-204ENST00000530395 TRAV14DV4A0A0A6YYC5 116 aa15.48■□□□□ 0.07
SMPD1-204ENST00000530395 TBPP20226 339 aa15.48■□□□□ 0.07
SMPD1-204ENST00000530395 AKR1C2P52895 323 aa15.48■□□□□ 0.07
SMPD1-204ENST00000530395 SLC35G3Q8N808 338 aa15.48■□□□□ 0.07
SMPD1-204ENST00000530395 RNF183Q96D59 192 aa15.48■□□□□ 0.07
SMPD1-204ENST00000530395 GINS3Q9BRX5 216 aa15.48■□□□□ 0.07
SMPD1-204ENST00000530395 NUPR2A6NF83 97 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 IGHV3-48P01763 117 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 SNCAP37840 140 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 NPBWR1P48145 328 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 PIGPP57054 158 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 LHFPL1Q86WI0 220 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 TMEM217Q8N7C4 229 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 C15orf40Q8WUR7 153 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 PDCD10Q9BUL8 212 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 EXTL2Q9UBQ6 330 aa15.47■□□□□ 0.07
SMPD1-204ENST00000530395 IGHV3-49A0A0A0MS15 119 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 CD5P06127 495 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 PI3P19957 117 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 TFPI2P48307 235 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 SPINK9Q5DT21 86 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 CCDC71LQ8N9Z2 235 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 DUSP18Q8NEJ0 188 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 ZNF414Q96IQ9 312 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 MAP6D1Q9H9H5 199 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 KLK11Q9UBX7 282 aa15.46■□□□□ 0.07
SMPD1-204ENST00000530395 IFNA17P01571 189 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 CD3DP04234 171 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 ZNF182P17025 639 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-204ENST00000530395 ATF4P18848 351 aaPredicted RBP15.45■□□□□ 0.06
SMPD1-204ENST00000530395 PPP5CP53041 499 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 PAFAH1B2P68402 229 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 IZUMO4Q1ZYL8 232 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 TRIM16LQ309B1 348 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 APRG1Q8IVJ8 170 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 OR52I2Q8NH67 350 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 TP53RKQ96S44 253 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 COPZ2Q9P299 210 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 MTFP1Q9UDX5 166 aa15.45■□□□□ 0.06
SMPD1-204ENST00000530395 IGKV3-7A0A075B6H7 116 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 C3orf85A0A1B0GTC6 90 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 INS-IGF2F8WCM5 200 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 CORTO00230 105 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 GABARAPO95166 117 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 IGKV1-5P01602 117 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 SUB1P53999 127 aaKnown RBP eCLIP15.44■□□□□ 0.06
SMPD1-204ENST00000530395 ZFAND1Q8TCF1 268 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 LINC00476Q8WZB0 136 aa15.44■□□□□ 0.06
SMPD1-204ENST00000530395 IGHV3OR16-13A0A075B7E8 117 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 IGHV3-74A0A0B4J1X5 117 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 ST8SIA3O43173 380 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 HOXA1P49639 335 aaPredicted RBP15.43■□□□□ 0.06
SMPD1-204ENST00000530395 CTF1Q16619 201 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 TOMM20LQ6UXN7 152 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 ZNF600Q6ZNG1 722 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 TCF24Q7RTU0 167 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 RNASE11Q8TAA1 199 aaKnown RBP15.43■□□□□ 0.06
SMPD1-204ENST00000530395 RRNAD1Q96FB5 475 aaKnown RBP15.43■□□□□ 0.06
SMPD1-204ENST00000530395 ENY2Q9NPA8 101 aa15.43■□□□□ 0.06
SMPD1-204ENST00000530395 A0A0B4J293 547 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 B3GALNT1O75752 331 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 P0C879 139 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 TAS2R19P59542 299 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 EWSR1Q01844 656 aaKnown RBP eCLIP15.42■□□□□ 0.06
SMPD1-204ENST00000530395 SCGB2B2Q4G0G5 96 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 FAM90A2PQ658T7 463 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 GBGT1Q8N5D6 347 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 TERB2Q8NHR7 220 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 NAA50Q9GZZ1 169 aaKnown RBP15.42■□□□□ 0.06
SMPD1-204ENST00000530395 CSTL1Q9H114 145 aa15.42■□□□□ 0.06
SMPD1-204ENST00000530395 KLK5Q9Y337 293 aaPredicted RBP15.42■□□□□ 0.06
SMPD1-204ENST00000530395 MPTX1A8MV57 137 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 SCGB2A1O75556 95 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 ZNF124Q15973 351 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 CEMP1Q6PRD7 247 aaPredicted RBP15.41■□□□□ 0.06
SMPD1-204ENST00000530395 TMEM229BQ8NBD8 167 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 GATAD1Q8WUU5 269 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 ST8SIA2Q92186 375 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 ABHD1Q96SE0 405 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 TMEM231Q9H6L2 316 aa15.41■□□□□ 0.06
SMPD1-204ENST00000530395 PUS1Q9Y606 427 aaKnown RBP eCLIP15.41■□□□□ 0.06
SMPD1-204ENST00000530395 DNASE2O00115 360 aaPredicted RBP15.4■□□□□ 0.06
SMPD1-204ENST00000530395 RAB3DO95716 219 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 LY6G6CO95867 125 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 CD74P04233 296 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 ETV6P41212 452 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 SP6Q3SY56 376 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 OR4D10Q8NGI6 311 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 OR13C8Q8NGS7 320 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 VSIRQ9H7M9 311 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 ZFAND3Q9H8U3 227 aa15.4■□□□□ 0.06
SMPD1-204ENST00000530395 TMEM50AO95807 157 aa15.39■□□□□ 0.05
SMPD1-204ENST00000530395 SMIM18P0DKX4 95 aa15.39■□□□□ 0.05
SMPD1-204ENST00000530395 RNASE2P10153 161 aaKnown RBP15.39■□□□□ 0.05
SMPD1-204ENST00000530395 UCP1P25874 307 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms