RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 RAB31Q13636 194 aa12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 PLGLAQ15195 96 aa12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 SLC16A13Q7RTY0 426 aa12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 STPG3Q8N7X2 389 aa12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 NPBQ8NG41 125 aa12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 FNDC4Q9H6D8 234 aaPredicted RBP12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 TBL2Q9Y4P3 447 aaKnown RBP12.33□□□□□ -0.44
CCDC90B-213ENST00000529611 FBP1P09467 338 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 PRR20EP86478 221 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 PRR20CP86479 221 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 PRR20DP86480 221 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 PRR20BP86481 221 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 PRR20AP86496 221 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 HES1Q14469 280 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 PVRIGQ6DKI7 326 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 ZNF114Q8NC26 417 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 SRSF12Q8WXF0 261 aaKnown RBP12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 AJUBAQ96IF1 538 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 TMPRSS5Q9H3S3 457 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 FBN2P35556 2912 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 DNASE2O00115 360 aaPredicted RBP12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 APELAP0DMC3 54 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 OR2T10Q8NGZ9 312 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 OR2T6Q8NHC8 308 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 SLC45A2Q9UMX9 530 aa12.32□□□□□ -0.44
CCDC90B-213ENST00000529611 FAM74A7A6NL05 159 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 LINC00869P0C866 280 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 MFAP2P55001 183 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 FAM74A3Q4VXF1 159 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 SOHLH1Q5JUK2 328 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 C19orf35Q6ZS72 473 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 CYB561D1Q8N8Q1 229 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 CLRN3Q8NCR9 226 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 SLC35E1Q96K37 410 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 CSMD2Q7Z408 3487 aa12.31□□□□□ -0.44
CCDC90B-213ENST00000529611 A0A1W2PPV4 95 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 NUPL2O15504 423 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 IFNA1P01562 189 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 PAX1P15863 534 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 OR10J1P30954 320 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 SAA4P35542 130 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 PAX8Q06710 450 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 EBI3Q14213 229 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 Q8N6K4 173 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 SUN5Q8TC36 379 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 MALSU1Q96EH3 234 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 ACY3Q96HD9 319 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 TMA7Q9Y2S6 64 aaKnown RBP12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 CHD6Q8TD26 2715 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 CELSR2Q9HCU4 2923 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 C5orf64Q2M2E5 130 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 VAX2Q9UIW0 290 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 USP9YO00507 2555 aaPredicted RBP12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 PTPN13Q12923 2485 aa12.3□□□□□ -0.44
CCDC90B-213ENST00000529611 CENPEQ02224 2701 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 TMEM249Q2WGJ8 235 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 RBMS3Q6XE24 437 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 OR1P1Q8NH06 330 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 MRPL36Q9P0J6 103 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 F11RQ9Y624 299 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 CENPVL3A0A0U1RRI6 287 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 CNIH1O95406 144 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 IGHV3-48P01763 117 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 GATA2P23769 480 aaPredicted RBP12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 CEBPGP53567 150 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 ABHD5Q8WTS1 349 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 MISP3Q96FF7 219 aa12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 SRSF8Q9BRL6 282 aaKnown RBP12.29□□□□□ -0.44
CCDC90B-213ENST00000529611 MAP1AP78559 2803 aaPredicted RBP12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 NPFFO15130 113 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 CRYGCP07315 174 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 STAG3L2P0CL84 134 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 STAG3L3P0CL85 134 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 TMEM88Q6PEY1 159 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 IQCF2Q8IXL9 164 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 GATAD1Q8WUU5 269 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 NPIPB3Q92617 1050 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 SEPSECSQ9HD40 501 aaKnown RBP12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 MANBALQ9NQG1 85 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 DMRT1Q9Y5R6 373 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 POLQO75417 2590 aa12.28□□□□□ -0.44
CCDC90B-213ENST00000529611 KMT2BQ9UMN6 2715 aaPredicted RBP12.27□□□□□ -0.44
CCDC90B-213ENST00000529611 ABCA1O95477 2261 aa12.27□□□□□ -0.44
CCDC90B-213ENST00000529611 MEF2BQ02080 365 aaPredicted RBP12.27□□□□□ -0.44
CCDC90B-213ENST00000529611 AWAT1Q58HT5 328 aa12.27□□□□□ -0.44
CCDC90B-213ENST00000529611 SPATA31B1PQ5VZV4 182 aa12.27□□□□□ -0.44
CCDC90B-213ENST00000529611 RUSC1-AS1Q66K80 236 aa12.27□□□□□ -0.44
CCDC90B-213ENST00000529611 CBLN2Q8IUK8 224 aa12.27□□□□□ -0.44
CCDC90B-213ENST00000529611 ANKRD17O75179 2603 aaKnown RBP12.27□□□□□ -0.45
CCDC90B-213ENST00000529611 IGKV1D-37A0A075B6S9 117 aa12.27□□□□□ -0.45
CCDC90B-213ENST00000529611 ARL14EPLP0DKL9 152 aa12.27□□□□□ -0.45
CCDC90B-213ENST00000529611 TMEM11P17152 192 aa12.27□□□□□ -0.45
CCDC90B-213ENST00000529611 PSMB3P49720 205 aa12.27□□□□□ -0.45
CCDC90B-213ENST00000529611 RND2P52198 227 aa12.27□□□□□ -0.45
CCDC90B-213ENST00000529611 DSCR9P59020 149 aa12.27□□□□□ -0.45
CCDC90B-213ENST00000529611 CD81P60033 236 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms