RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 A0A0G2JND7 137 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 A0A1B0GV50 99 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 A0A1W2PPB8 328 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 A0A1W2PRS3 328 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 KIR3DP1A8MWS1 328 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 C16orf90A8MZG2 172 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 SYNGR1O43759 233 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 SOX14O95416 240 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 HLA-DQB2P05538 268 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 IGKV4-1P06312 121 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 AKAIN1P0CW23 69 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 SMIM10L2AP0DMW4 78 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 SMIM10L2BP0DMW5 78 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 OR12D1P0DN82 309 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 RPL12P30050 165 aaKnown RBP2.2□□□□□ -2.06
CTR9-204ENST00000529355 PYCR1P32322 319 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 GABRA3P34903 492 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 INPP1P49441 399 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 EMP1P54849 157 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 NDUFA6P56556 154 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 RAB38P57729 211 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 LCN6P62502 163 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 PSG4Q00888 419 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 HIST1H1AQ02539 215 aaPredicted RBP2.2□□□□□ -2.06
CTR9-204ENST00000529355 SMAGPQ0VAQ4 97 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 TAL2Q16559 108 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 TRMT12Q53H54 448 aaKnown RBP2.2□□□□□ -2.06
CTR9-204ENST00000529355 ACTL10Q5JWF8 245 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 GLT8D1Q68CQ7 371 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 XAF1Q6GPH4 301 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 OR10K2Q6IF99 312 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 TNFAIP8L2Q6P589 184 aaPredicted RBP2.2□□□□□ -2.06
CTR9-204ENST00000529355 LINC00336Q6ZUF6 198 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 UMODL1-AS1Q8N2C9 162 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 SPANXA2-OT1Q8N9U9 137 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 OR4B1Q8NGF8 309 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 OR1J4Q8NGS1 313 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 OR4X1Q8NH49 305 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 ZNF675Q8TD23 568 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 BAALCQ8WXS3 180 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 PSMF1Q92530 271 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 APOBEC3DQ96AK3 386 aaPredicted RBP2.2□□□□□ -2.06
CTR9-204ENST00000529355 CCDC115Q96NT0 180 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 PEBP4Q96S96 227 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 EBPLQ9BY08 206 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 SMIM3Q9BZL3 60 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 C20orf27Q9GZN8 174 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 LPAR5Q9H1C0 372 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 OR2D2Q9H210 308 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 ASF1BQ9NVP2 202 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 UQCR10Q9UDW1 63 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 CES1P1Q9UKY3 287 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 TNFSF18Q9UNG2 199 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 SIGLEC7Q9Y286 467 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 MRPS16Q9Y3D3 137 aaKnown RBP2.2□□□□□ -2.06
CTR9-204ENST00000529355 PREX1Q8TCU6 1659 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 TOPBP1Q92547 1522 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 CCDC88CQ9P219 2028 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 RIMBP3Q9UFD9 1639 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 TRPM7Q96QT4 1865 aa2.2□□□□□ -2.06
CTR9-204ENST00000529355 MYLKQ15746 1914 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 ATRNO75882 1429 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 RGPD4Q7Z3J3 1758 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 TRPM2O94759 1503 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 A0A087WUU8 490 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 A0A0D9SG52 128 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 hADV38S2A0JD32 116 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 DAPL1A0PJW8 107 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 A6NDN8 102 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 FABP5P3A8MUU1 101 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 H7C1C5 153 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 K7EN84 100 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 MFNGO00587 321 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 CDC42EP2O14613 210 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 TAAR5O14804 337 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 LYRM1O43325 122 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 ENSAO43768 121 aaKnown RBP2.19□□□□□ -2.06
CTR9-204ENST00000529355 SLC37A4O43826 429 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 CFDP00746 253 aaPredicted RBP2.19□□□□□ -2.06
CTR9-204ENST00000529355 IGHV3-11P01762 117 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 MAS1P04201 325 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 CD14P08571 375 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 PGA4P0DJD7 388 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 PGA3P0DJD8 388 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 PGA5P0DJD9 388 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 FABP4P15090 132 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 GABRG2P18507 467 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 ORM2P19652 201 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 NFYAP23511 347 aaPredicted RBP2.19□□□□□ -2.06
CTR9-204ENST00000529355 CDK2P24941 298 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 COL8A2P25067 703 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 NFYBP25208 207 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 RPA3P35244 121 aaPredicted RBP2.19□□□□□ -2.06
CTR9-204ENST00000529355 G6PCP35575 357 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 NBL1P41271 181 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 GUCA1AP43080 201 aaPredicted RBP2.19□□□□□ -2.06
CTR9-204ENST00000529355 OR1E2P47887 323 aa2.19□□□□□ -2.06
CTR9-204ENST00000529355 POLR2HP52434 150 aaKnown RBP2.19□□□□□ -2.06
CTR9-204ENST00000529355 HSPE1P61604 102 aaKnown RBP2.19□□□□□ -2.06
CTR9-204ENST00000529355 RPS15AP62244 130 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms