RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 TBCEQ15813 527 aaPredicted RBP9.78□□□□□ -0.84
HIF3A-212ENST00000529205 LGALS9BQ3B8N2 356 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 KCTD21Q4G0X4 260 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 CMTM1Q8IZ96 169 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 OR5AP2Q8NGF4 316 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 ST8SIA2Q92186 375 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 PINX1Q96BK5 328 aaKnown RBP9.78□□□□□ -0.84
HIF3A-212ENST00000529205 YTHDF1Q9BYJ9 559 aaKnown RBP9.78□□□□□ -0.84
HIF3A-212ENST00000529205 VSIRQ9H7M9 311 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 RHBDL2Q9NX52 303 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 TBC1D24Q9ULP9 559 aa9.78□□□□□ -0.84
HIF3A-212ENST00000529205 TRAV18A0A075B6X5 111 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 I3L2K1 104 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 RTL8CO15255 209 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 MT-CO2P00403 227 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 RLN1P04808 185 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 GNRHRP30968 328 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 G6PCP35575 357 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 NPBWR1P48145 328 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 TOMM20LQ6UXN7 152 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 TRPT1Q86TN4 253 aaKnown RBP9.77□□□□□ -0.85
HIF3A-212ENST00000529205 UBE2DNLQ8IWF7 75 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 MOB3AQ96BX8 217 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 NARS2Q96I59 477 aaKnown RBP9.77□□□□□ -0.85
HIF3A-212ENST00000529205 ZNF414Q96IQ9 312 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 BLOC1S6Q9UL45 172 aa9.77□□□□□ -0.85
HIF3A-212ENST00000529205 IGHV3-66A0A0C4DH42 116 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 SCGB2A1O75556 95 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 PGLYRP1O75594 196 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-212ENST00000529205 NPPCP23582 126 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 S100GP29377 79 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 NUTF2P61970 127 aaKnown RBP9.76□□□□□ -0.85
HIF3A-212ENST00000529205 ERHP84090 104 aaKnown RBP9.76□□□□□ -0.85
HIF3A-212ENST00000529205 UBE2UQ5VVX9 321 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 ZNF600Q6ZNG1 722 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 LGALS14Q8TCE9 139 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 FCAMRQ8WWV6 532 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 GRAMD2BQ96HH9 432 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 C1QTNF4Q9BXJ3 329 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 DIABLOQ9NR28 239 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 X6R8D5 127 aa9.76□□□□□ -0.85
HIF3A-212ENST00000529205 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-212ENST00000529205 A0A0A6YYH2 397 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 A6NJ64 397 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 APOHP02749 345 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-212ENST00000529205 FCER2P06734 321 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 EIF2B2P49770 351 aaKnown RBP9.75□□□□□ -0.85
HIF3A-212ENST00000529205 SCAND1P57086 179 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 FAM24BQ8N5W8 94 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 ZNF114Q8NC26 417 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 STXBP6Q8NFX7 210 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 OR4A16Q8NH70 328 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 IFT46Q9NQC8 304 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 EHFQ9NZC4 300 aa9.75□□□□□ -0.85
HIF3A-212ENST00000529205 PUS1Q9Y606 427 aaKnown RBP eCLIP9.75□□□□□ -0.85
HIF3A-212ENST00000529205 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 FGF9P31371 208 aaPredicted RBP9.74□□□□□ -0.85
HIF3A-212ENST00000529205 C12orf74Q32Q52 190 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 ACTL10Q5JWF8 245 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 SFXN4Q6P4A7 337 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 H2BFWTQ7Z2G1 175 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 LILRB2Q8N423 598 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 METTL26Q96S19 204 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 ZNF2Q9BSG1 426 aaPredicted RBP9.74□□□□□ -0.85
HIF3A-212ENST00000529205 TXNL4BQ9NX01 149 aaKnown RBP9.74□□□□□ -0.85
HIF3A-212ENST00000529205 CLEC5AQ9NY25 188 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 SSR3Q9UNL2 185 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 RYR1P21817 5038 aa9.74□□□□□ -0.85
HIF3A-212ENST00000529205 K7EQG2 157 aa9.73□□□□□ -0.85
HIF3A-212ENST00000529205 GIG44P09565 113 aaPredicted RBP9.73□□□□□ -0.85
HIF3A-212ENST00000529205 ZNF688P0C7X2 276 aa9.73□□□□□ -0.85
HIF3A-212ENST00000529205 C4BPBP20851 252 aa9.73□□□□□ -0.85
HIF3A-212ENST00000529205 SNCAP37840 140 aa9.73□□□□□ -0.85
HIF3A-212ENST00000529205 PRCDQ00LT1 54 aa9.73□□□□□ -0.85
HIF3A-212ENST00000529205 DHRS11Q6UWP2 260 aa9.73□□□□□ -0.85
HIF3A-212ENST00000529205 ZNF767PQ75MW2 155 aa9.73□□□□□ -0.85
HIF3A-212ENST00000529205 IGLV2-18A0A075B6J9 118 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 KNCNA6PVL3 124 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 GPR31O00270 319 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 TNFAIP8O95379 198 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 TMEM50AO95807 157 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.85
HIF3A-212ENST00000529205 LPCAT3Q6P1A2 487 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 OR6F1Q8NGZ6 308 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 TMEM230Q96A57 120 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 FAM210BQ96KR6 192 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 AUNIPQ9H7T9 357 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 ZFAND3Q9H8U3 227 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
HIF3A-212ENST00000529205 DBX1A6NMT0 343 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 CORTO00230 105 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 SPART-AS1P0CW21 52 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 P2RY1P47900 373 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 AP2S1P53680 142 aaPredicted RBP9.71□□□□□ -0.86
HIF3A-212ENST00000529205 HSPE1P61604 102 aaKnown RBP9.71□□□□□ -0.86
HIF3A-212ENST00000529205 NEDD8Q15843 81 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 IDNKQ5T6J7 187 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 ZNF575Q86XF7 245 aa9.71□□□□□ -0.86
HIF3A-212ENST00000529205 CSNK1G2-AS1Q8NCQ2 148 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms