RNA–Protein interactions for RNA: ENST00000529182.5

VPS28-210, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2 BASIC

Gene VPS28, Length 1,010 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-210ENST00000529182 OR4E1P0C645 316 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 RNASE2P10153 161 aaKnown RBP10.2□□□□□ -0.78
VPS28-210ENST00000529182 SNCAP37840 140 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 UBE2MP61081 183 aaKnown RBP10.2□□□□□ -0.78
VPS28-210ENST00000529182 IFITM3Q01628 133 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 DHRS2Q13268 280 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 SMCO1Q147U7 214 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 IL34Q6ZMJ4 242 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 UBAC2Q8NBM4 344 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 OR9G4Q8NGQ1 327 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 OR52E5Q8NH55 327 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 PINX1Q96BK5 328 aaKnown RBP10.2□□□□□ -0.78
VPS28-210ENST00000529182 OR4C12Q96R67 309 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 ELOVL1Q9BW60 279 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 C21orf62Q9NYP8 219 aa10.2□□□□□ -0.78
VPS28-210ENST00000529182 TRAV6A0A075B6T7 132 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 IGHV3-35A0A0C4DH35 117 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 DUXBA0A1W2PPF3 345 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 WI2-2373I1.2A0A1W2PRP0 233 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 I3L2K1 104 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 TGOLN2O43493 480 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 TCRBP04435 133 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 EDN2P20800 178 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 INSL3P51460 131 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 TATDN3Q17R31 274 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 C4orf46Q504U0 113 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 PDLIM3Q53GG5 364 aaPredicted RBP10.19□□□□□ -0.78
VPS28-210ENST00000529182 FAM209BQ5JX69 171 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 LYG2Q86SG7 212 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 OR52B4Q8NGK2 314 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 OR1S1Q8NH92 325 aa10.19□□□□□ -0.78
VPS28-210ENST00000529182 HEYLQ9NQ87 328 aaPredicted RBP10.19□□□□□ -0.78
VPS28-210ENST00000529182 A0A1B0GU03 582 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 K7EIL1 84 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 ADAP1O75689 374 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 CSN3P07498 182 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 TNFRSF9Q07011 255 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 ASAH1Q13510 395 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 Q56UQ5 140 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 GGNBP1Q5YKI7 109 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 PLET1Q6UQ28 207 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 MRAPQ8TCY5 172 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 PRR25Q96S07 402 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 CHRDL1Q9BU40 450 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 RBKSQ9H477 322 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 NUDT15Q9NV35 164 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 HSPB7Q9UBY9 170 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 TMED3Q9Y3Q3 217 aa10.18□□□□□ -0.78
VPS28-210ENST00000529182 FAM240BA0A1B0GVZ2 78 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 PITX3O75364 302 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 ADMP35318 185 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 MLANAQ16655 118 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 BSXQ3C1V8 233 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 PVRIGQ6DKI7 326 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 UNQ9165/PRO28630Q6UXU0 137 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 ADAMTSL5Q6ZMM2 481 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 REC114Q7Z4M0 266 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 GPHB5Q86YW7 130 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 COQ8AQ8NI60 647 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 TMEM170AQ8WVE7 144 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 TGP01266 2768 aa10.17□□□□□ -0.78
VPS28-210ENST00000529182 PIGBOS1A0A0B4J2F0 54 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 ZNF320A2RRD8 509 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 MPTX1A8MV57 137 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 H2AFB2P0C5Z0 115 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 SPNP16150 400 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 HTR2BP41595 481 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 SUB1P53999 127 aaKnown RBP eCLIP10.16□□□□□ -0.78
VPS28-210ENST00000529182 MZT2BQ6NZ67 158 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 SLC24A4Q8NFF2 622 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 DTD1Q8TEA8 209 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 CACNG8Q8WXS5 425 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 BSCL2Q96G97 398 aaPredicted RBP10.16□□□□□ -0.78
VPS28-210ENST00000529182 SEC22CQ9BRL7 303 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 FNDC4Q9H6D8 234 aaPredicted RBP10.16□□□□□ -0.78
VPS28-210ENST00000529182 PEMTQ9UBM1 199 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 ZNF256Q9Y2P7 627 aaPredicted RBP10.16□□□□□ -0.78
VPS28-210ENST00000529182 SELENOKQ9Y6D0 94 aa10.16□□□□□ -0.78
VPS28-210ENST00000529182 C2orf70A6NJV1 201 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 LGALS9O00182 355 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 LY86O95711 162 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 IGLV1-51P01701 117 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 CTSGP08311 255 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 IAPPP10997 89 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 SLC25A6P12236 298 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 OPRK1P41145 380 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 MFAP4P55083 255 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 FAM106AQ4KMX7 169 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 TM4SF20Q53R12 229 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 C2orf83Q53S99 150 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 ZNF414Q96IQ9 312 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 HIPK2Q9H2X6 1198 aa10.15□□□□□ -0.78
VPS28-210ENST00000529182 MRPL36Q9P0J6 103 aaKnown RBP10.15□□□□□ -0.78
VPS28-210ENST00000529182 ZMAT5Q9UDW3 170 aaKnown RBP10.15□□□□□ -0.78
VPS28-210ENST00000529182 IGHV3OR16-8A0A075B7F1 116 aa10.14□□□□□ -0.79
VPS28-210ENST00000529182 TMEM213A2RRL7 107 aa10.14□□□□□ -0.79
VPS28-210ENST00000529182 IZUMO1RA6ND01 250 aa10.14□□□□□ -0.79
VPS28-210ENST00000529182 FOLR2P14207 255 aa10.14□□□□□ -0.79
VPS28-210ENST00000529182 NPY1RP25929 384 aa10.14□□□□□ -0.79
VPS28-210ENST00000529182 FCGR2BP31994 310 aaPredicted RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms