RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 IFNA17P01571 189 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 SNCAP37840 140 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 ETV6P41212 452 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 SUB1P53999 127 aaKnown RBP eCLIP9.14□□□□□ -0.952e-9■■■■■ 55.6
TRAPPC4-209ENST00000528230 MFAP4P55083 255 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 TM4SF20Q53R12 229 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 ZNF57Q68EA5 555 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 PVRIGQ6DKI7 326 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 UNQ9165/PRO28630Q6UXU0 137 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 SELENOHQ8IZQ5 122 aaKnown RBP9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 TOMM5Q8N4H5 51 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 SLC35G3Q8N808 338 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 UXS1Q8NBZ7 420 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 RNASE11Q8TAA1 199 aaKnown RBP9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 TMEM190Q8WZ59 177 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 IL22RA2Q969J5 263 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 TRIM63Q969Q1 353 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 MCUBQ9NWR8 336 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 CACFD1Q9UGQ2 172 aa9.14□□□□□ -0.95
TRAPPC4-209ENST00000528230 IGHV3-21A0A0B4J1V1 117 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 PIGBOS1A0A0B4J2F0 54 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 A0A0G2JRQ6 117 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 K7EMT4 169 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 CORTO00230 105 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 NUPL2O15504 423 aaKnown RBP9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 MT-CO2P00403 227 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 CTSGP08311 255 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 EDN2P20800 178 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 ADMP35318 185 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 SPCS3P61009 180 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 ZNF79Q15937 498 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 Q56UQ5 140 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 Q6ZRM9 215 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 LHFPL5Q8TAF8 219 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 TMEM230Q96A57 120 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 MISP3Q96FF7 219 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 CHRDL1Q9BU40 450 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 ENY2Q9NPA8 101 aa9.13□□□□□ -0.95
TRAPPC4-209ENST00000528230 IGHV3-35A0A0C4DH35 117 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 CD81P60033 236 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 RELQ04864 619 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 TMEM187Q14656 261 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 GUCA2BQ16661 112 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 SPANXN2Q5MJ10 180 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 TMEM268Q5VZI3 342 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 TMEM61Q8N0U2 210 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 UBAC2Q8NBM4 344 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 CACNG8Q8WXS5 425 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 SLC25A21Q9BQT8 299 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 NEURL2Q9BR09 285 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 TUBA4BQ9H853 241 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 DAZ1Q9NQZ3 744 aaKnown RBP9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 NDUFA13Q9P0J0 144 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 MLXQ9UH92 298 aa9.12□□□□□ -0.95
TRAPPC4-209ENST00000528230 C15orf62A8K5M9 175 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 RNASE2P10153 161 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 ANXA3P12429 323 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 NPBWR1P48145 328 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 SRPXP78539 464 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 BSXQ3C1V8 233 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 ANKRD55Q3KP44 614 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 SPINK9Q5DT21 86 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 DUSP18Q8NEJ0 188 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 PINX1Q96BK5 328 aaKnown RBP9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 WDR89Q96FK6 387 aaPredicted RBP9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 DNAH9Q9NYC9 4486 aa9.11□□□□□ -0.95
TRAPPC4-209ENST00000528230 A0A0B4J2A0 478 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 GNG7O60262 68 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 CD7P09564 240 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 AKR1C4P17516 323 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 HTR2BP41595 481 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 HOXA1P49639 335 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 SUPT4H1P63272 117 aaKnown RBP9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 TMEM128Q5BJH2 165 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 LAMTOR1Q6IAA8 161 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 BTNL8Q6UX41 500 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 LINC00322Q6ZN03 302 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 RBPMS2Q6ZRY4 209 aaKnown RBP9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 SLC16A13Q7RTY0 426 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 LGI3Q8N145 548 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 RCHY1Q96PM5 261 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 SRRQ9GZT4 340 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 CACNG5Q9UF02 275 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 SHPKQ9UHJ6 478 aa9.1□□□□□ -0.95
TRAPPC4-209ENST00000528230 OR11H12B2RN74 326 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 TMEM50AO95807 157 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 SULT1A3P0DMM9 295 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 SULT1A4P0DMN0 295 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 CCR6P51684 374 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 HAGHQ16775 308 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 ZNF414Q96IQ9 312 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 OR10C1Q96KK4 312 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 SPAG8Q99932 426 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 C20orf24Q9BUV8 137 aa9.09□□□□□ -0.95
TRAPPC4-209ENST00000528230 HEYLQ9NQ87 328 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms