RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 MOB3BQ86TA1 216 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 OR5T1Q8NG75 326 aa12.42□□□□□ -0.42
USH1C-207ENST00000527720 MRPL32Q9BYC8 188 aaKnown RBP12.42□□□□□ -0.42
USH1C-207ENST00000527720 SSX2Q16385 188 aa12.41□□□□□ -0.42
USH1C-207ENST00000527720 FAM122AQ96E09 287 aa12.41□□□□□ -0.42
USH1C-207ENST00000527720 ZNF430Q9H8G1 570 aaPredicted RBP12.41□□□□□ -0.42
USH1C-207ENST00000527720 RBP4P02753 201 aa12.41□□□□□ -0.42
USH1C-207ENST00000527720 FABP1P07148 127 aa12.41□□□□□ -0.42
USH1C-207ENST00000527720 MRPL41Q8IXM3 137 aaKnown RBP12.41□□□□□ -0.42
USH1C-207ENST00000527720 ZNF114Q8NC26 417 aa12.41□□□□□ -0.42
USH1C-207ENST00000527720 GSN-AS1Q9NRJ2 163 aa12.41□□□□□ -0.42
USH1C-207ENST00000527720 SPTBN2O15020 2390 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 CGB1A6NKQ9 187 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 ACTL6BO94805 426 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 C1QTNF9P0C862 333 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 PPOXP50336 477 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 PRRX1P54821 245 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 PSG5Q15238 335 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 COA6Q5JTJ3 125 aaKnown RBP12.4□□□□□ -0.42
USH1C-207ENST00000527720 ACTL10Q5JWF8 245 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 MUC15Q8N387 334 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 TEX45Q8NA69 505 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 ACY3Q96HD9 319 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 GPR61Q9BZJ8 451 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 E7EUB6 86 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 WT1-ASQ06250 92 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 TMEM183AQ8IXX5 376 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 ST6GALNAC3Q8NDV1 305 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 OCC1Q8TAD7 63 aa12.4□□□□□ -0.42
USH1C-207ENST00000527720 PLAUP00749 431 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 MLANAQ16655 118 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 GFI1BQ5VTD9 330 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 TEX38Q6PEX7 206 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 LINC01560Q8TB33 94 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 SLC25A33Q9BSK2 321 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 TRAV9-1A0A075B6T8 112 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 PGPEP1LA6NFU8 196 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 IGLV1-47P01700 117 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 C8orf88P0DMB2 117 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 PYY3Q5JQD4 70 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 DNLZQ5SXM8 178 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 OR10G8Q8NGN5 311 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 PFDN5Q99471 154 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 MIOXQ9UGB7 285 aa12.39□□□□□ -0.43
USH1C-207ENST00000527720 IGHV2-26A0A0B4J1V2 119 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 A0A1W2PRE2 83 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 PSMB11A5LHX3 300 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 SLC25A17O43808 307 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 IGHV2-70P01814 119 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 KLRB1Q12918 225 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 ZNF672Q499Z4 452 aaPredicted RBP12.38□□□□□ -0.43
USH1C-207ENST00000527720 ZNF841Q6ZN19 808 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 MMD2Q8IY49 270 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 THAP8Q8NA92 274 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 BEND2Q8NDZ0 799 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 OR10D4PQ8NGN7 298 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 ZNF503Q96F45 646 aa12.38□□□□□ -0.43
USH1C-207ENST00000527720 AURKAIP1Q9NWT8 199 aaPredicted RBP12.38□□□□□ -0.43
USH1C-207ENST00000527720 TLN1Q9Y490 2541 aaKnown RBP12.38□□□□□ -0.43
USH1C-207ENST00000527720 CCL21O00585 134 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 OR7C2O60412 319 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 GATA2P23769 480 aaPredicted RBP12.37□□□□□ -0.43
USH1C-207ENST00000527720 SELENOTP62341 195 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 PVRIGQ6DKI7 326 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 ETFRF1Q6IPR1 90 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 OR1L4Q8NGR5 311 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 OR1P1Q8NH06 330 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 OR2T6Q8NHC8 308 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 SGMS2Q8NHU3 365 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 C8orf46Q8TAG6 207 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 TMEM37Q8WXS4 190 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 DNAJC4Q9NNZ3 241 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 COL8A2P25067 703 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 PDLIM4P50479 330 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 CLEC12BQ2HXU8 276 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 MRGPRG-AS1Q2M3A8 158 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 EAF1Q96JC9 268 aaPredicted RBP12.37□□□□□ -0.43
USH1C-207ENST00000527720 CLEC7AQ9BXN2 247 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 MALRD1Q5VYJ5 2156 aa12.37□□□□□ -0.43
USH1C-207ENST00000527720 ADGRG4Q8IZF6 3080 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 DCHS1Q96JQ0 3298 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 A0A1W2PPI3 338 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 FNDC4Q9H6D8 234 aaPredicted RBP12.36□□□□□ -0.43
USH1C-207ENST00000527720 A0A0U1RQK1 487 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 ZNF320A2RRD8 509 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 SIAH2O43255 324 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 ENSAO43768 121 aaKnown RBP12.36□□□□□ -0.43
USH1C-207ENST00000527720 CRYGBP07316 175 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 FABP4P15090 132 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 RPL15P61313 204 aaKnown RBP12.36□□□□□ -0.43
USH1C-207ENST00000527720 PDZD11Q5EBL8 140 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 AMMECR1Q9Y4X0 333 aaPredicted RBP12.36□□□□□ -0.43
USH1C-207ENST00000527720 NAV3Q8IVL0 2385 aa12.36□□□□□ -0.43
USH1C-207ENST00000527720 SMG1Q96Q15 3661 aaKnown RBP12.35□□□□□ -0.43
USH1C-207ENST00000527720 XKRY2A2RUG3 117 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 HELTA6NFD8 242 aa12.35□□□□□ -0.43
USH1C-207ENST00000527720 BUB1B-PAK6H3BSN5 160 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms