RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PRSS46E5RG02 174 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 MPDU1O75352 247 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 CHRNA7P36544 502 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 LMO4P61968 165 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 SSX7Q7RTT5 188 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 VMO1Q7Z5L0 202 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 RPP25LQ8N5L8 163 aaKnown RBP13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 ANAPC16Q96DE5 110 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 PFDN5Q99471 154 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 PYGO2Q9BRQ0 406 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 TET2Q6N021 2002 aaPredicted RBP13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 IFITM10A6NMD0 228 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 TRGC1P0CF51 173 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 KLRD1Q13241 179 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 TMEM249Q2WGJ8 235 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 BTF3L4Q96K17 158 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 OR5B12Q96R08 314 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 RNF5Q99942 180 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 NPVFQ9HCQ7 196 aa13.05□□□□□ -0.32
SNRNP35-204ENST00000527158 IGHV2-70DA0A0C4DH43 119 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 ODF3BA8MYP8 253 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 VENTXO95231 258 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 BSXQ3C1V8 233 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 HCP5Q6MZN7 132 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 OR10G9Q8NGN4 311 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 OR10G7Q8NGN6 311 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 DOPEY1Q5JWR5 2465 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 A0A1W2PPI3 338 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 INS-IGF2F8WCM5 200 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 FOXH1O75593 365 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 ACTL6BO94805 426 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 ACOT6Q3I5F7 207 aaPredicted RBP13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 C2orf83Q53S99 150 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 PYY3Q5JQD4 70 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 TREML4Q6UXN2 200 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 SPNS3Q6ZMD2 512 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 MMD2Q8IY49 270 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 OR10W1Q8NGF6 305 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 FAM168AQ92567 244 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 HILPDAQ9Y5L2 63 aa13.04□□□□□ -0.32
SNRNP35-204ENST00000527158 TRAV20A0A0B4J274 112 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 PAX2Q02962 417 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 PSG5Q15238 335 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 FRZBQ92765 325 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 TIMM23O14925 209 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 LGALS4P56470 323 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 ADIRFQ15847 76 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 FAM209BQ5JX69 171 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 LDLRAD2Q5SZI1 272 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 ACSM6Q6P461 480 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 MRPL41Q8IXM3 137 aaKnown RBP13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 OR10D4PQ8NGN7 298 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 ABHD5Q8WTS1 349 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 TPSG1Q9NRR2 321 aa13.03□□□□□ -0.32
SNRNP35-204ENST00000527158 FNDC10F2Z333 226 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 H7BYZ3 331 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 NDUFS8O00217 210 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 PHOX2AO14813 284 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 TOX4O94842 621 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 PFN1P07737 140 aaKnown RBP13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 COX6B1P14854 86 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 HIST1H1BP16401 226 aaKnown RBP13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 ATP5J2P56134 94 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 PRSS8Q16651 343 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 TXNDC17Q9BRA2 123 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 SIRPDQ9H106 197 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 SIGLEC9Q9Y336 463 aa13.02□□□□□ -0.33
SNRNP35-204ENST00000527158 A0A1W2PRD5 423 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 A0A1W2PRF3 423 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 A0A1W2PRM7 423 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 E7EUB6 86 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 IGKV1D-33P01593 117 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 IGKV1-33P01594 117 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 CRYGBP07316 175 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 RNASE2P10153 161 aaKnown RBP13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 CNTFRP26992 372 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 SRP14P37108 136 aaKnown RBP13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 SUB1P53999 127 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 RAB31Q13636 194 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 ARSJQ5FYB0 599 aaPredicted RBP13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 CCDC144NLQ6NUI1 221 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 CLEC2AQ6UVW9 174 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 LHFPL4Q7Z7J7 247 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 HOXB4P17483 251 aaPredicted RBP13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 FAM3BP58499 235 aaPredicted RBP13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 RPL23P62829 140 aaKnown RBP13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 C10orf55Q5SWW7 151 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 MINOS1Q5TGZ0 78 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 TEPPQ6URK8 271 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 C16orf82Q7Z2V1 217 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 PPP1R27Q86WC6 154 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 KCNIP2Q9NS61 270 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 MINOS1-NBL1R4GNA1 71 aa13.01□□□□□ -0.33
SNRNP35-204ENST00000527158 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 OOSP1A8MZH6 123 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 PPP5D1E7EU14 171 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 PDE6DO43924 150 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 OPRK1P41145 380 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms