RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 H0YIZ8 118 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 IGHV3-23P01764 117 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 LGALS1P09382 135 aaKnown RBP8.28□□□□□ -1.08
NEDD8-205ENST00000527046 HIST1H1BP16401 226 aaKnown RBP8.28□□□□□ -1.08
NEDD8-205ENST00000527046 ATP5G2Q06055 141 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 PRR31Q5SQ13 230 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 WFDC9Q8NEX5 89 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 OR11H1Q8NG94 326 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 OR4C12Q96R67 309 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 GSKIPQ9P0R6 139 aa8.28□□□□□ -1.08
NEDD8-205ENST00000527046 A0A0G2JLM5 398 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 K7EPK0 472 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 CCL24O00175 119 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 BMPR1BO00238 502 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 WRBO00258 174 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 GOSR2O14653 212 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 IGHV3-48P01763 117 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 HSPB1P04792 205 aaKnown RBP8.27□□□□□ -1.09
NEDD8-205ENST00000527046 IAPPP10997 89 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 DEFA4P12838 97 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 ADMP35318 185 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 MYCNOSP40205 109 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 NKX2-1P43699 371 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-205ENST00000527046 HOXA1P49639 335 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-205ENST00000527046 FCN2Q15485 313 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 Q6ZNX1 250 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 HAPLN4Q86UW8 402 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 MRPL41Q8IXM3 137 aaKnown RBP8.27□□□□□ -1.09
NEDD8-205ENST00000527046 LINC00482Q8N8I6 264 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 OR1N2Q8NGR9 330 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 VN1R17PQ8TDU5 208 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 SMIM8Q96KF7 97 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 PDCD10Q9BUL8 212 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 RNF126Q9BV68 326 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 HEYLQ9NQ87 328 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-205ENST00000527046 VWFP04275 2813 aa8.27□□□□□ -1.09
NEDD8-205ENST00000527046 ANKRD34BA5PLL1 514 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 C5orf51A6NDU8 294 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 FAM25EA8MYX2 175 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 CCNKO75909 580 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 MT-CO2P00403 227 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 CLEC3BP05452 202 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 CTSGP08311 255 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 FCGR2BP31994 310 aaPredicted RBP8.26□□□□□ -1.09
NEDD8-205ENST00000527046 HTR2BP41595 481 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 ARL16Q0P5N6 197 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 RAB32Q13637 225 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 EXOSC2Q13868 293 aaKnown RBP8.26□□□□□ -1.09
NEDD8-205ENST00000527046 Q5BKY6 102 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 KHDC1LQ5JSQ8 128 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 GSG1LQ6UXU4 331 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 SLC24A4Q8NFF2 622 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 OR1L6Q8NGR2 347 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 CHAC2Q8WUX2 184 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 DLX4Q92988 240 aaPredicted RBP8.26□□□□□ -1.09
NEDD8-205ENST00000527046 PEF1Q9UBV8 284 aaKnown RBP8.26□□□□□ -1.09
NEDD8-205ENST00000527046 CACFD1Q9UGQ2 172 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 U3KQ87 197 aa8.26□□□□□ -1.09
NEDD8-205ENST00000527046 NUDT19A8MXV4 375 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 PPP5D1E7EU14 171 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 MED6O75586 246 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 NPY1RP25929 384 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 SNCAP37840 140 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 SLURP1P55000 103 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 KLF5Q13887 457 aaPredicted RBP8.25□□□□□ -1.09
NEDD8-205ENST00000527046 PRSS54Q6PEW0 395 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 CLEC19AQ6UXS0 136 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 IL34Q6ZMJ4 242 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 MISP3Q96FF7 219 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 CHRDL1Q9BU40 450 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 NMES1Q9C002 83 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 HIPK2Q9H2X6 1198 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 MGAT4CQ9UBM8 478 aa8.25□□□□□ -1.09
NEDD8-205ENST00000527046 TRBV7-1A0A0A6YYK4 115 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 G3V3Q6 166 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 M0QZ24 198 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 SSNA1O43805 119 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 OR2C1O95371 312 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 IFNA10P01566 189 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 SUB1P53999 127 aaKnown RBP eCLIP8.24□□□□□ -1.096e-8■■■■□ 23
NEDD8-205ENST00000527046 ATP5IP56385 69 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-205ENST00000527046 TAS2R30P59541 319 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 RRAS2P62070 204 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-205ENST00000527046 CD69Q07108 199 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 ZNF616Q08AN1 781 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 ADAMTSL5Q6ZMM2 481 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 OR4F17Q8NGA8 305 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 RNASEH2CQ8TDP1 164 aaKnown RBP8.24□□□□□ -1.09
NEDD8-205ENST00000527046 DCUN1D4Q92564 292 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 PINX1Q96BK5 328 aaKnown RBP8.24□□□□□ -1.09
NEDD8-205ENST00000527046 CXorf58Q96LI9 332 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 OR4F4Q96R69 305 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 RAB40CQ96S21 281 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 RANGRFQ9HD47 186 aaPredicted RBP8.24□□□□□ -1.09
NEDD8-205ENST00000527046 ENY2Q9NPA8 101 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 C21orf62Q9NYP8 219 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 PSENENQ9NZ42 101 aa8.24□□□□□ -1.09
NEDD8-205ENST00000527046 IGKV1D-37A0A075B6S9 117 aa8.23□□□□□ -1.09
NEDD8-205ENST00000527046 TRAV14DV4A0A0A6YYC5 116 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms