RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 TMEM14BQ9NUH8 114 aa13.73□□□□□ -0.21
CAPN1-206ENST00000526966 EHFQ9NZC4 300 aa13.73□□□□□ -0.21
CAPN1-206ENST00000526966 PRNDQ9UKY0 176 aa13.73□□□□□ -0.21
CAPN1-206ENST00000526966 ANAPC10Q9UM13 185 aa13.73□□□□□ -0.21
CAPN1-206ENST00000526966 MEIS3P1A6NDR6 274 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 DBX1A6NMT0 343 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 C15orf61A6NNL5 157 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 I3L2K1 104 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 NUPL2O15504 423 aaKnown RBP13.72□□□□□ -0.21
CAPN1-206ENST00000526966 SNAPC5O75971 98 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 OR11H2Q8NH07 326 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 CMTM3Q96MX0 182 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 ZNF2Q9BSG1 426 aaPredicted RBP13.72□□□□□ -0.21
CAPN1-206ENST00000526966 FKBP11Q9NYL4 201 aa13.72□□□□□ -0.21
CAPN1-206ENST00000526966 IGHV3-49A0A0A0MS15 119 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 TFPI2P48307 235 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 RFX2P48378 723 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 TCTAP57738 103 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 PRR20EP86478 221 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 PRR20CP86479 221 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 PRR20DP86480 221 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 PRR20BP86481 221 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 PRR20AP86496 221 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 MZT2AQ6P582 158 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 TXN2Q99757 166 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 SLIRPQ9GZT3 109 aaKnown RBP13.71□□□□□ -0.21
CAPN1-206ENST00000526966 NXF2Q9GZY0 626 aaKnown RBP13.71□□□□□ -0.21
CAPN1-206ENST00000526966 FXYD6Q9H0Q3 95 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 IFT46Q9NQC8 304 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 FBXL17Q9UF56 701 aa13.71□□□□□ -0.21
CAPN1-206ENST00000526966 AGRNO00468 2067 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 XRCC3O43542 346 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 IFNA4P05014 189 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 MFAP4P55083 255 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 CMTM1Q8IZ96 169 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 CENPSQ8N2Z9 138 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 ZNF114Q8NC26 417 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 COMMD3Q9UBI1 195 aa13.7□□□□□ -0.22
CAPN1-206ENST00000526966 IGKV3-7A0A075B6H7 116 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 TRAV14DV4A0A0A6YYC5 116 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 GPR31O00270 319 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 YIF1AO95070 293 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 NAT1P18440 290 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 OXA1LQ15070 435 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 UBE2NLQ5JXB2 153 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 SAMD12Q8N8I0 201 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 C2CD4CQ8TF44 421 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 MISP3Q96FF7 219 aa13.69□□□□□ -0.22
CAPN1-206ENST00000526966 FAM212BQ9NTI7 297 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-206ENST00000526966 IGHV3OR16-13A0A075B7E8 117 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 IGHV3-74A0A0B4J1X5 117 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 CA1P00915 261 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-206ENST00000526966 APOA1P02647 267 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 CD5P06127 495 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 HNRNPCP07910 306 aaKnown RBP eCLIP13.68□□□□□ -0.22
CAPN1-206ENST00000526966 TRIM16LQ309B1 348 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 TCF24Q7RTU0 167 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 GBGT1Q8N5D6 347 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 VSIRQ9H7M9 311 aa13.68□□□□□ -0.22
CAPN1-206ENST00000526966 MT-CO2P00403 227 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 PMP2P02689 132 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 BCAP31P51572 246 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 PPP5CP53041 499 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 TAS2R46P59540 309 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 PAFAH1B2P68402 229 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 TMEM187Q14656 261 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 OR5H2Q8NGV7 314 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 S100A16Q96FQ6 103 aaKnown RBP13.67□□□□□ -0.22
CAPN1-206ENST00000526966 SEC22AQ96IW7 307 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 GINS3Q9BRX5 216 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 FAT2Q9NYQ8 4349 aa13.67□□□□□ -0.22
CAPN1-206ENST00000526966 hCG_2014768A0A024R1R8 64 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 TRAV2A0A0B4J234 112 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 DEFB4AO15263 64 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 HPGDSO60760 199 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 DFFBO76075 338 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 EIF4EP06730 217 aaKnown RBP13.66□□□□□ -0.22
CAPN1-206ENST00000526966 PRCDQ00LT1 54 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 Q8NAQ8 132 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 OR6F1Q8NGZ6 308 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 MCFD2Q8NI22 146 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 ST8SIA2Q92186 375 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 FAM210AQ96ND0 272 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 HRH4Q9H3N8 390 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 APLNQ9ULZ1 77 aa13.66□□□□□ -0.22
CAPN1-206ENST00000526966 PKHD1P08F94 4074 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 CTDSP2O14595 271 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 GNG7O60262 68 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 IGKV1-39P01597 117 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 IGHV3-48P01763 117 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 IGKV1D-39P04432 117 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 ELK1P19419 428 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 ETV6P41212 452 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 TAS2R20P59543 309 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 TOMM20LQ6UXN7 152 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 LILRB2Q8N423 598 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 MS4A6AQ9H2W1 248 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 ZFAND3Q9H8U3 227 aa13.65□□□□□ -0.22
CAPN1-206ENST00000526966 DNAH2Q9P225 4427 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms