RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, human

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF1-208	ENST00000526821	VMA21	Q3ZAQ7	101 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CLLU1	Q5K131	121 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821		Q5PR19	223 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CCDC144NL	Q6NUI1	221 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	STX12	Q86Y82	276 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PDZD9	Q8IXQ8	264 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	NPB	Q8NG41	125 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR5C1	Q8NGR4	320 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SUN5	Q8TC36	379 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TMEM170A	Q8WVE7	144 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TSNAX	Q99598	290 aa	Known RBP	4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	GINS3	Q9BRX5	216 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	REG4	Q9BYZ8	158 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SMIM3	Q9BZL3	60 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ZC4H2	Q9NQZ6	224 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FKBP11	Q9NYL4	201 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	UBQLN2	Q9UHD9	624 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SIGLEC9	Q9Y336	463 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HILPDA	Q9Y5L2	63 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR51B2	Q9Y5P1	312 aa		4.88	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HECTD1	Q9ULT8	2610 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGHV1-69D	A0A0B4J2H0	117 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821		E7EUB6	86 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821		J3QLI3	93 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FGF16	O43320	207 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SPRY2	O43597	315 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	MOS	P00540	346 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGHV1-69	P01742	117 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SNRNP70	P08621	437 aa	Known RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	NMB	P08949	121 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	METTL15P1	P0C7V9	234 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FAM157C	P0CG43	387 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	MDK	P21741	143 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	MAS1L	P35410	378 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SAA4	P35542	130 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HTR2B	P41595	481 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ATP5I	P56385	69 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CTAG1A	P78358	180 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PJVK	Q0ZLH3	352 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ZNF266	Q14584	549 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	VWC2	Q2TAL6	325 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SPINK9	Q5DT21	86 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	KLF17	Q5JT82	389 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SPANXN5	Q5MJ07	72 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PVRIG	Q6DKI7	326 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ALKAL2	Q6UX46	152 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	MMD2	Q8IY49	270 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR1S2	Q8NGQ3	325 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR1L8	Q8NGR8	309 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ATP5S	Q99766	215 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	COMMD5	Q9GZQ3	224 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SLC25A32	Q9H2D1	315 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HIPK2	Q9H2X6	1198 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HEYL	Q9NQ87	328 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HIF1AN	Q9NWT6	349 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	GAR1	Q9NY12	217 aa	Known RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	NUP50	Q9UKX7	468 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PRELID1	Q9Y255	219 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	STRAP	Q9Y3F4	350 aa	Known RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	AUP1	Q9Y679	476 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TET2	Q6N021	2002 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ZNF469	Q96JG9	3925 aa	Predicted RBP	4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ZAN	Q9Y493	2812 aa		4.87	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ITPR3	Q14573	2671 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	LINC00862	A6NCI5	91 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	FCN1	O00602	326 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RRH	O14718	337 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	NBR2	O15453	112 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	DFFB	O76075	338 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CA2	P00918	260 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGKV1D-33	P01593	117 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGKV1-33	P01594	117 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	OR8U8	P0C7N1	319 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SEC11B	P0C7V7	166 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGHV4-31	P0DP07	118 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	IGHV4-38-2	P0DP08	117 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RNASE2	P10153	161 aa	Known RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SPP1	P10451	314 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	BTF3	P20290	206 aa	Known RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PAX6	P26367	422 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HOXA1	P49639	335 aa	Predicted RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	COMP	P49747	757 aa	Predicted RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	F2RL1	P55085	397 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HBG1	P69891	147 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	HBG2	P69892	147 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	RPP30	P78346	268 aa	Known RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	WT1-AS	Q06250	92 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	SLC38A11	Q08AI6	406 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CLINT1	Q14677	625 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	ATP6V1F	Q16864	119 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TMEM249	Q2WGJ8	235 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	C2orf83	Q53S99	150 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	C10orf55	Q5SWW7	151 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	CENPV	Q7Z7K6	275 aa	Predicted RBP	4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	PPP1R27	Q86WC6	154 aa		4.86	□□□□□ -1.63
ATPAF1-208	ENST00000526821	TMEM217	Q8N7C4	229 aa		4.86	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms