RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 AKAIN1P0CW23 69 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 ARL14EPLP0DKL9 152 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 MGST1P10620 155 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SPI1P17947 270 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 FGF7P21781 194 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 HLA-DMBP28068 263 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SRIP30626 198 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 LPAR6P43657 344 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 RPL27AP46776 148 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 ATP5G3P48201 142 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 GZMMP51124 257 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TAS2R20P59543 309 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 S100A10P60903 97 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 RAB5BP61020 215 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 YPEL3P61236 119 aaPredicted RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 ERVS71-1P61550 626 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 HSPE1P61604 102 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 LSM3P62310 102 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TBPL1P62380 186 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 UBE2BP63146 152 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H1AQ02539 215 aaPredicted RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 AKR1C1Q04828 323 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PLCXD2Q0VAA5 305 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 DHRS2Q13268 280 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 EIF3IQ13347 325 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 CIRBPQ14011 172 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 FAM53BQ14153 422 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 RTL8BQ17RB0 113 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PLPPR5Q32ZL2 321 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 HSD17B12Q53GQ0 312 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PYDC2Q56P42 97 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 LDLRAD2Q5SZI1 272 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IBA57Q5T440 356 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 C1orf194Q5T5A4 169 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 AADACL3Q5VUY0 350 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 FKBP1CQ5VVH2 108 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 GLYATQ6IB77 296 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 NOXRED1Q6NXP6 359 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SFXN4Q6P4A7 337 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 RPL22L1Q6P5R6 122 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM136Q6ZRR5 245 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 Q6ZS49 121 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 CLEC20AQ6ZU45 233 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 LINC00305Q7Z4B0 112 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 VN1R4Q7Z5H5 301 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SLC35E3Q7Z769 313 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 GKN2Q86XP6 184 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM25Q86YD3 366 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST3H2BBQ8N257 126 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM86AQ8N2M4 240 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 ZNF664Q8N3J9 261 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 C10orf126Q8N4M7 172 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 KCNRGQ8N5I3 272 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TCTEX1D1Q8N7M0 179 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM229BQ8NBD8 167 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4E2Q8NGC2 313 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR11H6Q8NGC7 330 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4B1Q8NGF8 309 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4X2Q8NGF9 303 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR8J3Q8NGG0 315 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR4D11Q8NGI4 311 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR2T10Q8NGZ9 312 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 OR51H1Q8NH63 302 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TERB2Q8NHR7 220 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SGMS2Q8NHU3 365 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 CD200R1Q8TD46 325 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 ITLN2Q8WWU7 325 aaPredicted RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 C11orf40Q8WZ69 217 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM106AQ96A25 262 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 RAB37Q96AX2 223 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 MS4A6EQ96DS6 147 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SLAMF6Q96DU3 332 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 IGF2BP2-AS1Q96M15 143 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PRAP1Q96NZ9 151 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 CIB3Q96Q77 187 aaPredicted RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PKMYT1Q99640 499 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 HIST1H2BLQ99880 126 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SHANK2-AS3Q9BTD1 123 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 RTL8AQ9BWD3 113 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 NPCDR1Q9BY65 106 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TTTY13Q9BZ97 58 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PBOV1Q9GZY1 135 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 ALX4Q9H161 411 aaPredicted RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 BOLA2Q9H3K6 86 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 EFCAB1Q9HAE3 211 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 CA10Q9NS85 328 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TXNL4BQ9NX01 149 aaKnown RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 FBXL12Q9NXK8 326 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 SPANXCQ9NY87 97 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TAS2R7Q9NYW3 318 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TNFSF18Q9UNG2 199 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 FUT9Q9Y231 359 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 COQ4Q9Y3A0 265 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 AMMECR1Q9Y4X0 333 aaPredicted RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 PHLDA3Q9Y5J5 127 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 NUBP2Q9Y5Y2 271 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TMEM56-RWDD3S4R434 201 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 U3KQ87 197 aa0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 TET2Q6N021 2002 aaPredicted RBP0.7□□□□□ -2.3
ECHDC1-219ENST00000526299 AHNAK2Q8IVF2 5795 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms