RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
CPSF1-201ENST00000526271 SPAG8Q99932 426 aaPredicted RBP10.49□□□□□ -0.73
CPSF1-201ENST00000526271 SLC5A7Q9GZV3 580 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 FXYD6Q9H0Q3 95 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 MAP6D1Q9H9H5 199 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 SCP2D1Q9UJQ7 156 aa10.49□□□□□ -0.73
CPSF1-201ENST00000526271 TRBV7-1A0A0A6YYK4 115 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 UPK2O00526 184 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 TGOLN2O43493 480 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 HIST1H1BP16401 226 aaKnown RBP10.48□□□□□ -0.73
CPSF1-201ENST00000526271 ELLP55199 621 aaPredicted RBP10.48□□□□□ -0.73
CPSF1-201ENST00000526271 SCGB2B2Q4G0G5 96 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 ZNF66Q6ZN08 573 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 ZNF818PQ6ZRF7 136 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 APRG1Q8IVJ8 170 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 VSTM2AQ8TAG5 236 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 SECTM1Q8WVN6 248 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 BORCS5Q969J3 196 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 MARC2Q969Z3 335 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 MCUBQ9NWR8 336 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 TBC1D24Q9ULP9 559 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 GPR132Q9UNW8 380 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 ABCA13Q86UQ4 5058 aa10.48□□□□□ -0.73
CPSF1-201ENST00000526271 IGHV3-21A0A0B4J1V1 117 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 KIR2DL5BA0A0G2JN68 375 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 KIR2DL5BA0A0G2JPC4 375 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 LINC00854A0A1B0GVQ3 168 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 OR2T8A6NH00 312 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 CENPXA8MT69 81 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 ZNF207O43670 478 aaKnown RBP10.47□□□□□ -0.73
CPSF1-201ENST00000526271 BTCP35070 178 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
CPSF1-201ENST00000526271 ASAH1Q13510 395 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 SURF2Q15527 256 aaPredicted RBP10.47□□□□□ -0.73
CPSF1-201ENST00000526271 ANKRD55Q3KP44 614 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 RBPMS2Q6ZRY4 209 aaKnown RBP10.47□□□□□ -0.73
CPSF1-201ENST00000526271 SLC38A6Q8IZM9 456 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 KIR2DL5AQ8N109 375 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 KIR2DL5BQ8NHK3 375 aa10.47□□□□□ -0.73
CPSF1-201ENST00000526271 GPR31O00270 319 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 LYRM1O43325 122 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 APOC4P55056 127 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 PLET1Q6UQ28 207 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 SPAG16Q8N0X2 631 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 OR5B3Q8NH48 314 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 ZFAND1Q8TCF1 268 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 MARCH1Q8TCQ1 289 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 ZNF486Q96H40 463 aaPredicted RBP10.46□□□□□ -0.73
CPSF1-201ENST00000526271 CXorf58Q96LI9 332 aa10.46□□□□□ -0.73
CPSF1-201ENST00000526271 SLC25A21Q9BQT8 299 aaPredicted RBP10.46□□□□□ -0.73
CPSF1-201ENST00000526271 RTBDNQ9BSG5 229 aaPredicted RBP10.46□□□□□ -0.73
CPSF1-201ENST00000526271 DBX1A6NMT0 343 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 K7EIM0 57 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 UBE2CO00762 179 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 RBFOX2O43251 390 aaKnown RBP eCLIP10.45□□□□□ -0.74
CPSF1-201ENST00000526271 PGLYRP1O75594 196 aaPredicted RBP10.45□□□□□ -0.74
CPSF1-201ENST00000526271 HRASP01112 189 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 CTSDP07339 412 aaPredicted RBP10.45□□□□□ -0.74
CPSF1-201ENST00000526271 CCR6P51684 374 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 RND3P61587 244 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 OR4A5Q8NH83 315 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 SCARB1Q8WTV0 552 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 SCGB3A2Q96PL1 93 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 AIFM2Q9BRQ8 373 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 TMEM140Q9NV12 185 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 UFC1Q9Y3C8 167 aa10.45□□□□□ -0.74
CPSF1-201ENST00000526271 TEX50A0A1B0GTY4 177 aa10.44□□□□□ -0.74
CPSF1-201ENST00000526271 DEFA4P12838 97 aa10.44□□□□□ -0.74
CPSF1-201ENST00000526271 PGAM2P15259 253 aa10.44□□□□□ -0.74
CPSF1-201ENST00000526271 FAM90A2PQ658T7 463 aa10.44□□□□□ -0.74
CPSF1-201ENST00000526271 CMTM1Q8IZ96 169 aa10.44□□□□□ -0.74
CPSF1-201ENST00000526271 VN1R17PQ8TDU5 208 aa10.44□□□□□ -0.74
CPSF1-201ENST00000526271 RNF2Q99496 336 aa10.44□□□□□ -0.74
CPSF1-201ENST00000526271 DAZ1Q9NQZ3 744 aaKnown RBP10.44□□□□□ -0.74
CPSF1-201ENST00000526271 KLK5Q9Y337 293 aaPredicted RBP10.44□□□□□ -0.74
CPSF1-201ENST00000526271 MUC4Q99102 2169 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 DEFB4AO15263 64 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 NDUFB6O95139 128 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 DHFRP00374 187 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 SERPINE2P07093 398 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 TAS2R31P59538 309 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 RBMS2Q15434 407 aaKnown RBP10.43□□□□□ -0.74
CPSF1-201ENST00000526271 MZT2BQ6NZ67 158 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 LILRB2Q8N423 598 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 STPG3Q8N7X2 389 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 CD300LFQ8TDQ1 290 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 QTRT1Q9BXR0 403 aaKnown RBP10.43□□□□□ -0.74
CPSF1-201ENST00000526271 NDUFA4L2Q9NRX3 87 aa10.43□□□□□ -0.74
CPSF1-201ENST00000526271 K7EMT4 169 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 NDUFA4O00483 81 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 HPRT1P00492 218 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 CTSGP08311 255 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 GIG44P09565 113 aaPredicted RBP10.42□□□□□ -0.74
CPSF1-201ENST00000526271 OR13C7P0DN81 318 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 PI3P19957 117 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 PIGPP57054 158 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 DEFA1P59665 94 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 DEFA3P59666 94 aa10.42□□□□□ -0.74
CPSF1-201ENST00000526271 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms