RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 OR1P1Q8NH06 330 aa13.42□□□□□ -0.26
CCS-204ENST00000526066 SMIM8Q96KF7 97 aa13.42□□□□□ -0.26
CCS-204ENST00000526066 P2RX4Q99571 388 aa13.42□□□□□ -0.26
CCS-204ENST00000526066 F11RQ9Y624 299 aaKnown RBP13.42□□□□□ -0.26
CCS-204ENST00000526066 U3KQ87 197 aa13.42□□□□□ -0.26
CCS-204ENST00000526066 TENM3Q9P273 2699 aa13.42□□□□□ -0.26
CCS-204ENST00000526066 CYB5BO43169 146 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 ELANEP08246 267 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 PET100P0DJ07 73 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 RNASE2P10153 161 aaKnown RBP13.41□□□□□ -0.26
CCS-204ENST00000526066 IAPPP10997 89 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 PVALBP20472 110 aaPredicted RBP13.41□□□□□ -0.26
CCS-204ENST00000526066 SUB1P53999 127 aaKnown RBP eCLIP13.41□□□□□ -0.26
CCS-204ENST00000526066 S100A10P60903 97 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 FOXE3Q13461 319 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 PVRIGQ6DKI7 326 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 ZNF329Q86UD4 541 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 NOXA1Q86UR1 476 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 RNF152Q8N8N0 203 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 SLC24A4Q8NFF2 622 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 C11orf1Q9H5F2 150 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 SLA2Q9H6Q3 261 aa13.41□□□□□ -0.26
CCS-204ENST00000526066 LSM5Q9Y4Y9 91 aaKnown RBP13.41□□□□□ -0.26
CCS-204ENST00000526066 IGLV11-55A0A075B6I3 123 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 WI2-2373I1.2A0A1W2PRP0 233 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 DEDDO75618 318 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 MPC2O95563 127 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 TMEM50AO95807 157 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 RLN2P04090 185 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 DEFA4P12838 97 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 HIST1H1BP16401 226 aaKnown RBP13.4□□□□□ -0.26
CCS-204ENST00000526066 PSMB8P28062 276 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 PAX9P55771 341 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 RPP30P78346 268 aaKnown RBP13.4□□□□□ -0.26
CCS-204ENST00000526066 FGL1Q08830 312 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 C2orf83Q53S99 150 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 FANCD2OSQ96PS1 177 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 B9D2Q9BPU9 175 aa13.4□□□□□ -0.26
CCS-204ENST00000526066 ZMAT5Q9UDW3 170 aaKnown RBP13.4□□□□□ -0.26
CCS-204ENST00000526066 RYR3Q15413 4870 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 TRBV9A0A0B4J1U6 114 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 L7N2F9 121 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 TSC22D2O75157 780 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 IFNA10P01566 189 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 NPY1RP25929 384 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 RPL23AP62750 156 aaKnown RBP13.39□□□□□ -0.27
CCS-204ENST00000526066 VAMP2P63027 116 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 LRRC37A5PQ49AS3 106 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 C10orf99Q6UWK7 81 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 PSENENQ9NZ42 101 aa13.39□□□□□ -0.27
CCS-204ENST00000526066 E5RGE8 158 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 H0YIZ8 118 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 HOXD3P31249 432 aaPredicted RBP13.38□□□□□ -0.27
CCS-204ENST00000526066 MFAP2P55001 183 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 PRSS54Q6PEW0 395 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 C19orf35Q6ZS72 473 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 OR2T35Q8NGX2 323 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 MYOZ3Q8TDC0 251 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 MCRIP2Q9BUT9 160 aaKnown RBP13.38□□□□□ -0.27
CCS-204ENST00000526066 RNF126Q9BV68 326 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 ZNF355PQ9NSJ1 428 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 STRAPQ9Y3F4 350 aaKnown RBP13.38□□□□□ -0.27
CCS-204ENST00000526066 DMRT1Q9Y5R6 373 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 COL7A1Q02388 2944 aa13.38□□□□□ -0.27
CCS-204ENST00000526066 TRAV14DV4A0A0A6YYC5 116 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 FAM223BA6NKX1 122 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 C15orf62A8K5M9 175 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 CORTO00230 105 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 PRH1P02810 166 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 LYL1P12980 280 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 RAB9AP51151 201 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 KRTAP10-11P60412 298 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 RAB11AP62491 216 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 SPANXN5Q5MJ07 72 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 TMEM65Q6PI78 240 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 FAM223AQ8IWN6 122 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 NECAP1Q8NC96 275 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 RNASEH2CQ8TDP1 164 aaKnown RBP13.37□□□□□ -0.27
CCS-204ENST00000526066 TMEM170AQ8WVE7 144 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 OR4C12Q96R67 309 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 THYN1Q9P016 225 aa13.37□□□□□ -0.27
CCS-204ENST00000526066 CCNKO75909 580 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 TRGV3P03979 118 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 RHOGP84095 191 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 EGFEM1PQ0D2K5 195 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 EXOSC2Q13868 293 aaKnown RBP13.36□□□□□ -0.27
CCS-204ENST00000526066 TMEM14EPQ6UXP3 125 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 THAP6Q8TBB0 222 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 USMG5Q96IX5 58 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 ST6GAL2Q96JF0 529 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 KLK15Q9H2R5 256 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 RANGRFQ9HD47 186 aaPredicted RBP13.36□□□□□ -0.27
CCS-204ENST00000526066 LYRM2Q9NU23 88 aaPredicted RBP13.36□□□□□ -0.27
CCS-204ENST00000526066 OR5AC2Q9NZP5 309 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 DNAH3Q8TD57 4116 aa13.36□□□□□ -0.27
CCS-204ENST00000526066 H3BP45 60 aa13.35□□□□□ -0.27
CCS-204ENST00000526066 OR2J3O76001 311 aa13.35□□□□□ -0.27
CCS-204ENST00000526066 SCAF4O95104 1147 aaKnown RBP13.35□□□□□ -0.27
CCS-204ENST00000526066 OR8U8P0C7N1 319 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms