RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 FAM90A2PQ658T7 463 aa13.84□□□□□ -0.19
PTP4A3-206ENST00000524028 FUNDC2Q9BWH2 189 aa13.84□□□□□ -0.19
PTP4A3-206ENST00000524028 VCX3AQ9NNX9 186 aa13.84□□□□□ -0.19
PTP4A3-206ENST00000524028 IGKV3-7A0A075B6H7 116 aa13.83□□□□□ -0.2
PTP4A3-206ENST00000524028 TRAV14DV4A0A0A6YYC5 116 aa13.83□□□□□ -0.2
PTP4A3-206ENST00000524028 ATF4P18848 351 aaPredicted RBP13.83□□□□□ -0.2
PTP4A3-206ENST00000524028 PINX1Q96BK5 328 aaKnown RBP13.83□□□□□ -0.2
PTP4A3-206ENST00000524028 IGKV1-5P01602 117 aa13.82□□□□□ -0.2
PTP4A3-206ENST00000524028 APOHP02749 345 aaPredicted RBP13.82□□□□□ -0.2
PTP4A3-206ENST00000524028 PI3P19957 117 aa13.82□□□□□ -0.2
PTP4A3-206ENST00000524028 LILRB2Q8N423 598 aa13.82□□□□□ -0.2
PTP4A3-206ENST00000524028 GBGT1Q8N5D6 347 aa13.82□□□□□ -0.2
PTP4A3-206ENST00000524028 A0A0B4J293 547 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 GNG7O60262 68 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 TNFAIP8O95379 198 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 P0C879 139 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 RNASE12Q5GAN4 147 aaKnown RBP13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 TOMM20LQ6UXN7 152 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 TP53RKQ96S44 253 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 CSTL1Q9H114 145 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 KLK11Q9UBX7 282 aa13.81□□□□□ -0.2
PTP4A3-206ENST00000524028 RND3P61587 244 aa13.8□□□□□ -0.2
PTP4A3-206ENST00000524028 ERHP84090 104 aaKnown RBP13.8□□□□□ -0.2
PTP4A3-206ENST00000524028 LHFPL1Q86WI0 220 aa13.8□□□□□ -0.2
PTP4A3-206ENST00000524028 ST8SIA2Q92186 375 aa13.8□□□□□ -0.2
PTP4A3-206ENST00000524028 CMC4P56277 68 aaPredicted RBP13.79□□□□□ -0.2
PTP4A3-206ENST00000524028 PVRIGQ6DKI7 326 aa13.79□□□□□ -0.2
PTP4A3-206ENST00000524028 TCF24Q7RTU0 167 aa13.79□□□□□ -0.2
PTP4A3-206ENST00000524028 C6orf62Q9GZU0 229 aaPredicted RBP13.79□□□□□ -0.2
PTP4A3-206ENST00000524028 VSIRQ9H7M9 311 aa13.79□□□□□ -0.2
PTP4A3-206ENST00000524028 ZFAND3Q9H8U3 227 aa13.79□□□□□ -0.2
PTP4A3-206ENST00000524028 IGHV3-66A0A0C4DH42 116 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 MPTX1A8MV57 137 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 ST8SIA3O43173 380 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 CD3DP04234 171 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 PGAM2P15259 253 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 RORCP51449 518 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 PIGPP57054 158 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 TMEM217Q8N7C4 229 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 DUSP18Q8NEJ0 188 aa13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 NAA50Q9GZZ1 169 aaKnown RBP13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 KLK5Q9Y337 293 aaPredicted RBP13.78□□□□□ -0.2
PTP4A3-206ENST00000524028 A0A1B0GU03 582 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 FAM25AB3EWG3 89 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 FAM25CB3EWG5 89 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 FAM25GB3EWG6 89 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 INS-IGF2F8WCM5 200 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 DFFBO76075 338 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 TMEM50AO95807 157 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 NPBWR1P48145 328 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 RNASE10Q5GAN6 216 aaKnown RBP13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 FAM24BQ8N5W8 94 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 OR4D10Q8NGI6 311 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 OR52I2Q8NH67 350 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 GATAD1Q8WUU5 269 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 ZNF486Q96H40 463 aaPredicted RBP13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 RARRES2Q99969 163 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 MS4A6AQ9H2W1 248 aa13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 MRPL36Q9P0J6 103 aaKnown RBP13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 PUS1Q9Y606 427 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTP4A3-206ENST00000524028 A0A0G2JRQ6 117 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 C3orf85A0A1B0GTC6 90 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 RNASE2P10153 161 aaKnown RBP13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 SNCAP37840 140 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 ETV6P41212 452 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 MLANAQ16655 118 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 SP6Q3SY56 376 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 ZNF600Q6ZNG1 722 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 ARRDC1Q8N5I2 433 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 RPP25LQ8N5L8 163 aaKnown RBP13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 SLC35G3Q8N808 338 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 ABHD1Q96SE0 405 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 GINS3Q9BRX5 216 aa13.76□□□□□ -0.21
PTP4A3-206ENST00000524028 IFNA17P01571 189 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 AKR1C2P52895 323 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 PPP5CP53041 499 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 PAFAH1B2P68402 229 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 CTF1Q16619 201 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 LEMD1Q68G75 181 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 OR11H2Q8NH07 326 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 FNDC4Q9H6D8 234 aaPredicted RBP13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 MTFP1Q9UDX5 166 aa13.75□□□□□ -0.21
PTP4A3-206ENST00000524028 KMT2AQ03164 3969 aa13.74□□□□□ -0.21
PTP4A3-206ENST00000524028 CD5P06127 495 aa13.74□□□□□ -0.21
PTP4A3-206ENST00000524028 DEFB131AP59861 70 aa13.74□□□□□ -0.21
PTP4A3-206ENST00000524028 NANOS2P60321 138 aaKnown RBP13.74□□□□□ -0.21
PTP4A3-206ENST00000524028 MZT2AQ6P582 158 aa13.74□□□□□ -0.21
PTP4A3-206ENST00000524028 Q6ZRM9 215 aa13.74□□□□□ -0.21
PTP4A3-206ENST00000524028 EXTL2Q9UBQ6 330 aa13.74□□□□□ -0.21
PTP4A3-206ENST00000524028 DNASE2O00115 360 aaPredicted RBP13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 CA1P00915 261 aaPredicted RBP13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 CD74P04233 296 aa13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 TRIM16LQ309B1 348 aa13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 OR13C8Q8NGS7 320 aa13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 TERB2Q8NHR7 220 aa13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 C11orf68Q9H3H3 251 aaKnown RBP13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 FRAS1Q86XX4 4008 aa13.73□□□□□ -0.21
PTP4A3-206ENST00000524028 TRAV2A0A0B4J234 112 aa13.72□□□□□ -0.21
PTP4A3-206ENST00000524028 DEFB4AO15263 64 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms