RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 C20orf24Q9BUV8 137 aa12.16□□□□□ -0.46
CLN8-206ENST00000523237 C15orf62A8K5M9 175 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 DISC1C4P0D8 188 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 CTDSPLO15194 276 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 MT-CO2P00403 227 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 IFNA17P01571 189 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 P0C879 139 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 UCP1P25874 307 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 FCGR2BP31994 310 aaPredicted RBP12.15□□□□□ -0.46
CLN8-206ENST00000523237 SNCAP37840 140 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 LAMTOR1Q6IAA8 161 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 FAAP20Q6NZ36 180 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
CLN8-206ENST00000523237 RRNAD1Q96FB5 475 aaKnown RBP12.15□□□□□ -0.46
CLN8-206ENST00000523237 SPAG8Q99932 426 aaPredicted RBP12.15□□□□□ -0.46
CLN8-206ENST00000523237 C6orf62Q9GZU0 229 aaPredicted RBP12.15□□□□□ -0.46
CLN8-206ENST00000523237 RETNQ9HD89 108 aa12.15□□□□□ -0.46
CLN8-206ENST00000523237 C14orf166Q9Y224 244 aaKnown RBP12.15□□□□□ -0.46
CLN8-206ENST00000523237 IGHV3OR16-8A0A075B7F1 116 aa12.14□□□□□ -0.47
CLN8-206ENST00000523237 A0A0B4J293 547 aa12.14□□□□□ -0.47
CLN8-206ENST00000523237 INS-IGF2F8WCM5 200 aa12.14□□□□□ -0.47
CLN8-206ENST00000523237 TSPAN4O14817 238 aa12.14□□□□□ -0.47
CLN8-206ENST00000523237 ST8SIA3O43173 380 aa12.14□□□□□ -0.47
CLN8-206ENST00000523237 AKAIN1P0CW23 69 aa12.14□□□□□ -0.47
CLN8-206ENST00000523237 RPL5P46777 297 aaKnown RBP12.14□□□□□ -0.47
CLN8-206ENST00000523237 SURF2Q15527 256 aaPredicted RBP12.14□□□□□ -0.47
CLN8-206ENST00000523237 SPINK9Q5DT21 86 aa12.14□□□□□ -0.47
CLN8-206ENST00000523237 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
CLN8-206ENST00000523237 TEX13DA0A0J9YY54 714 aaPredicted RBP12.13□□□□□ -0.47
CLN8-206ENST00000523237 ZNF207O43670 478 aaKnown RBP12.13□□□□□ -0.47
CLN8-206ENST00000523237 GNG7O60262 68 aa12.13□□□□□ -0.47
CLN8-206ENST00000523237 OR4C16Q8NGL9 310 aa12.13□□□□□ -0.47
CLN8-206ENST00000523237 LOC102724200A0A096LPH7 203 aaPredicted RBP12.12□□□□□ -0.47
CLN8-206ENST00000523237 CORTO00230 105 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 YIF1AO95070 293 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 IGHV3-48P01763 117 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 OR5AC1P0C628 307 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 NPBWR1P48145 328 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 HOXA1P49639 335 aaPredicted RBP12.12□□□□□ -0.47
CLN8-206ENST00000523237 SUB1P53999 127 aaKnown RBP eCLIP12.12□□□□□ -0.47
CLN8-206ENST00000523237 ZFAND6Q6FIF0 208 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 FAM219AQ8IW50 185 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 OR10C1Q96KK4 312 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 PRRT1Q99946 306 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 FAM110AQ9BQ89 295 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 RTBDNQ9BSG5 229 aaPredicted RBP12.12□□□□□ -0.47
CLN8-206ENST00000523237 GGTLC1Q9BX51 225 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 SLIRPQ9GZT3 109 aaKnown RBP12.12□□□□□ -0.47
CLN8-206ENST00000523237 NXF2Q9GZY0 626 aaKnown RBP12.12□□□□□ -0.47
CLN8-206ENST00000523237 TMEM222Q9H0R3 208 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 NAA60Q9H7X0 242 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 ENY2Q9NPA8 101 aa12.12□□□□□ -0.47
CLN8-206ENST00000523237 RSL24D1Q9UHA3 163 aaKnown RBP12.12□□□□□ -0.47
CLN8-206ENST00000523237 H3BMQ9 156 aa12.11□□□□□ -0.47
CLN8-206ENST00000523237 GSTZ1O43708 216 aaPredicted RBP12.11□□□□□ -0.47
CLN8-206ENST00000523237 CDS2O95674 445 aa12.11□□□□□ -0.47
CLN8-206ENST00000523237 ETV6P41212 452 aa12.11□□□□□ -0.47
CLN8-206ENST00000523237 DHODHQ02127 395 aa12.11□□□□□ -0.47
CLN8-206ENST00000523237 DUSP18Q8NEJ0 188 aa12.11□□□□□ -0.47
CLN8-206ENST00000523237 SMPXQ9UHP9 88 aa12.11□□□□□ -0.47
CLN8-206ENST00000523237 A0A0G2JRQ6 117 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 ANKRD20A5PA0PJZ0 165 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 OR4C46A6NHA9 309 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 OR51S1Q8NGJ8 323 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 GLYATL2Q8WU03 294 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 RBPMSQ93062 196 aaKnown RBP12.1□□□□□ -0.47
CLN8-206ENST00000523237 ZNF414Q96IQ9 312 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 GPR132Q9UNW8 380 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 DNAH7Q8WXX0 4024 aa12.1□□□□□ -0.47
CLN8-206ENST00000523237 TRAV14DV4A0A0A6YYC5 116 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 FABP12A6NFH5 140 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 CRYM-AS1A6NIL9 109 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 CHEK1O14757 476 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 RNASE2P10153 161 aaKnown RBP12.09□□□□□ -0.47
CLN8-206ENST00000523237 TNFSF8P32971 234 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 SPCS3P61009 180 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 PVRIGQ6DKI7 326 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 Q6ZRM9 215 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 MCFD2Q8NI22 146 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 IL17DQ8TAD2 202 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 LHFPL5Q8TAF8 219 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 RNF2Q99496 336 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 GINS3Q9BRX5 216 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 RHPN1-AS1Q9BWJ2 59 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.09□□□□□ -0.47
CLN8-206ENST00000523237 UBQLN2Q9UHD9 624 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 SCP2D1Q9UJQ7 156 aa12.09□□□□□ -0.47
CLN8-206ENST00000523237 BMI1P35226 326 aa12.08□□□□□ -0.48
CLN8-206ENST00000523237 AARDQ4LEZ3 155 aa12.08□□□□□ -0.48
CLN8-206ENST00000523237 TMEM268Q5VZI3 342 aa12.08□□□□□ -0.48
CLN8-206ENST00000523237 SELENOHQ8IZQ5 122 aaKnown RBP12.08□□□□□ -0.48
CLN8-206ENST00000523237 OR52E5Q8NH55 327 aa12.08□□□□□ -0.48
CLN8-206ENST00000523237 SCGB3A2Q96PL1 93 aa12.08□□□□□ -0.48
CLN8-206ENST00000523237 RYR3Q15413 4870 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 IGHV3-49A0A0A0MS15 119 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 SCGB2A1O75556 95 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 TMEM50AO95807 157 aa12.07□□□□□ -0.48
CLN8-206ENST00000523237 OPRK1P41145 380 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms