RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 SLC35E1Q96K37 410 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 MGST2Q99735 147 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 NKX6-2Q9C056 277 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 SLC25A22Q9H936 323 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 SLC39A9Q9NUM3 307 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 METTL1Q9UBP6 276 aaKnown RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 POLR3KQ9Y2Y1 108 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 SIGLEC9Q9Y336 463 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 TBL2Q9Y4P3 447 aaKnown RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 LSM4Q9Y4Z0 139 aaKnown RBP5.49□□□□□ -1.53
CSMD1-211ENST00000523062 PXMP4Q9Y6I8 212 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 IGSF10Q6WRI0 2623 aa5.49□□□□□ -1.53
CSMD1-211ENST00000523062 TNCP24821 2201 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 A0A1W2PRD5 423 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 A0A1W2PRF3 423 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 A0A1W2PRM7 423 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 IGLC7A0M8Q6 106 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 C9JQL5 133 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 NBR2O15453 112 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 CYB5BO43169 146 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 TSPAN9O75954 239 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 TOX4O94842 621 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 MOSP00540 346 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 HSPB1P04792 205 aaKnown RBP5.48□□□□□ -1.53
CSMD1-211ENST00000523062 OR13C7P0DN81 318 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 CNTFRP26992 372 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 GPX4P36969 197 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-211ENST00000523062 COMPP49747 757 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-211ENST00000523062 UBE2E1P51965 193 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 DSCR9P59020 149 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 B2MP61769 119 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 WT1-ASQ06250 92 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 CD69Q07108 199 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 PMS2P11Q13670 270 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 ICAM4Q14773 271 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 PLGLAQ15195 96 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 MMDQ15546 238 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 GUCA2BQ16661 112 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 HAGHQ16775 308 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 MRGPRG-AS1Q2M3A8 158 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 LDLRAD2Q5SZI1 272 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 RBMS3Q6XE24 437 aaKnown RBP5.48□□□□□ -1.53
CSMD1-211ENST00000523062 SSX7Q7RTT5 188 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 LHFPL4Q7Z7J7 247 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 PPP1R27Q86WC6 154 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 RPP25LQ8N5L8 163 aaKnown RBP5.48□□□□□ -1.53
CSMD1-211ENST00000523062 ZNF114Q8NC26 417 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 OR10W1Q8NGF6 305 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 OR2T10Q8NGZ9 312 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 SUN5Q8TC36 379 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 RXFP4Q8TDU9 374 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 TBX15Q96SF7 602 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 P2RX4Q99571 388 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 SRSF8Q9BRL6 282 aaKnown RBP5.48□□□□□ -1.53
CSMD1-211ENST00000523062 FBXL15Q9H469 300 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 LPAR2Q9HBW0 351 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 GNG13Q9P2W3 67 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 HILPDAQ9Y5L2 63 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 KALRNO60229 2985 aa5.48□□□□□ -1.53
CSMD1-211ENST00000523062 ZFP92A6NM28 416 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 VWC2LB2RUY7 222 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 E7EUB6 86 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 CORTO00230 105 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 YIF1AO95070 293 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 NDUFA3O95167 84 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 SNRNP70P08621 437 aaKnown RBP5.47□□□□□ -1.53
CSMD1-211ENST00000523062 SRP19P09132 144 aaKnown RBP5.47□□□□□ -1.53
CSMD1-211ENST00000523062 PAX1P15863 534 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 RPL29P47914 159 aaKnown RBP5.47□□□□□ -1.53
CSMD1-211ENST00000523062 SLURP1P55000 103 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 FGF8P55075 233 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-211ENST00000523062 GNB1P62873 340 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 BTN1A1Q13410 526 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 TMEM249Q2WGJ8 235 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 SOHLH1Q5JUK2 328 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 MIC13Q5XKP0 118 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 ETFRF1Q6IPR1 90 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 ATRAIDQ6UW56 229 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 STPG3Q8N7X2 389 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 CLRN3Q8NCR9 226 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 NPBQ8NG41 125 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 SSMEM1Q8WWF3 244 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 RAB24Q969Q5 203 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 C1orf159Q96HA4 380 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 EAF1Q96JC9 268 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-211ENST00000523062 RARRES2Q99969 163 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 MANBALQ9NQG1 85 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 VAX2Q9UIW0 290 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 NBEAQ8NFP9 2946 aa5.47□□□□□ -1.53
CSMD1-211ENST00000523062 AKAP6Q13023 2319 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 SPTAN1Q13813 2472 aaKnown RBP5.46□□□□□ -1.54
CSMD1-211ENST00000523062 CFAP46Q8IYW2 2715 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 IGHV4-61A0A0C4DH41 118 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 A0A1W2PPV4 95 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 TEX22C9J3V5 150 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 NDUFS6O75380 124 aaKnown RBP5.46□□□□□ -1.54
CSMD1-211ENST00000523062 MT-CO2P00403 227 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 REG1AP05451 166 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 OR10J1P30954 320 aa5.46□□□□□ -1.54
CSMD1-211ENST00000523062 NPBWR1P48145 328 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms