RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SYNJ2BPP57105 145 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 TAS2R31P59538 309 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 ARPC4P59998 168 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 RND3P61587 244 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 TSPAN5P62079 268 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 TWIST1Q15672 202 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM30BQ3MIR4 351 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 C6orf183Q5T699 404 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 LCN12Q6JVE5 192 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 FAAP20Q6NZ36 180 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 KCTD9Q7L273 389 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 H1FOOQ8IZA3 346 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-210ENST00000522843 TCTE3Q8IZS6 198 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 LINC00311Q8N616 119 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF565Q8N9K5 539 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 OR10A7Q8NGE5 316 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 OR52M1Q8NGK5 317 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 UBALD1Q8TB05 177 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 MRGPRDQ8TDS7 321 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF431Q8TF32 576 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-210ENST00000522843 MITD1Q8WV92 249 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 GALNT14Q96FL9 552 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 MS4A10Q96PG2 267 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 RAB9BQ9NP90 201 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 EHFQ9NZC4 300 aa4.9□□□□□ -1.63
SDCBP-210ENST00000522843 FOXA2Q9Y261 457 aaPredicted RBP4.9□□□□□ -1.63
SDCBP-210ENST00000522843 MEIKINA0A087WXM9 373 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 C9orf170A2RU37 121 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 NPIPB5A8MRT5 1133 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 SDCBPO00560 298 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-210ENST00000522843 HSPB6O14558 160 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 CREBL2O60519 120 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-210ENST00000522843 SLC22A5O76082 557 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 TRBV12-3P01733 135 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 HOXB5P09067 269 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 RCC1P18754 421 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-210ENST00000522843 ANXA7P20073 488 aaKnown RBP4.89□□□□□ -1.63
SDCBP-210ENST00000522843 EDN2P20800 178 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 FCGR2CP31995 323 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 HLA-DRB3P79483 266 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 DHRS2Q13268 280 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 MMDQ15546 238 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 Q3ZCU0 254 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 IGSF11Q5DX21 431 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 SLC38A6Q8IZM9 456 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 MAPKAPK5-AS1Q8N8E1 139 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 LRTM2Q8N967 370 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM230Q96A57 120 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF2Q9BSG1 426 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-210ENST00000522843 MED28Q9H204 178 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 TAF9BQ9HBM6 251 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 FAM212BQ9NTI7 297 aaPredicted RBP4.89□□□□□ -1.63
SDCBP-210ENST00000522843 KCNIP1Q9NZI2 227 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 APLNQ9ULZ1 77 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 OR2W1Q9Y3N9 320 aa4.89□□□□□ -1.63
SDCBP-210ENST00000522843 IGHV3-43A0A0B4J1X8 118 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 PIGBOS1A0A0B4J2F0 54 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 FCN1O00602 326 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 YPEL1O60688 119 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 CCNKO75909 580 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 SFT2D2O95562 160 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 PPYP01298 95 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 RLN1P04808 185 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 IGHV3-43DP0DP04 118 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 ZP3P21754 424 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 GNRHRP30968 328 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF137PP52743 207 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 TPPP2P59282 170 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 SUPT4H1P63272 117 aaKnown RBP4.88□□□□□ -1.63
SDCBP-210ENST00000522843 CX3CL1P78423 397 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 DEFA5Q01523 94 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 FCN2Q15485 313 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 C5orf64Q2M2E5 130 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 SCGB2B2Q4G0G5 96 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM268Q5VZI3 342 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 AKAP14Q86UN6 197 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 C12orf45Q8N5I9 185 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-210ENST00000522843 C8orf31Q8N9H6 132 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF439Q8NDP4 499 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 OR10J5Q8NHC4 309 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 MARCH1Q8TCQ1 289 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 NEK7Q8TDX7 302 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 MAFIPQ8WZ33 124 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 GALMQ96C23 342 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 YPEL2Q96QA6 119 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 AGMATQ9BSE5 352 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 FAM103A1Q9BTL3 118 aaKnown RBP4.88□□□□□ -1.63
SDCBP-210ENST00000522843 ABHD14AQ9BUJ0 271 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 GGTLC1Q9BX51 225 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 CHMP1AQ9HD42 196 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-210ENST00000522843 RANGRFQ9HD47 186 aaPredicted RBP4.88□□□□□ -1.63
SDCBP-210ENST00000522843 PIPOXQ9P0Z9 390 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 TRAPPC2LQ9UL33 140 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 KCNIP3Q9Y2W7 256 aa4.88□□□□□ -1.63
SDCBP-210ENST00000522843 CRYM-AS1A6NIL9 109 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 GPR31O00270 319 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 NBR2O15453 112 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 SPINT2O43291 252 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 CDK2AP2O75956 126 aa4.87□□□□□ -1.63
SDCBP-210ENST00000522843 NDUFA3O95167 84 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms