RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 SMPXQ9UHP9 88 aa4.43□□□□□ -1.7
VPS13B-211ENST00000522802 C15orf62A8K5M9 175 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 FOXI3A8MTJ6 420 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-211ENST00000522802 TRDCB7Z8K6 153 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 NUPL2O15504 423 aaKnown RBP4.42□□□□□ -1.7
VPS13B-211ENST00000522802 DCTN3O75935 186 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 SPP1P10451 314 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 CELP19835 753 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 PTBP1P26599 531 aaKnown RBP eCLIP4.42□□□□□ -1.71e-8■■■■■ 57.6
VPS13B-211ENST00000522802 ETV1P50549 477 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 EMP1P54849 157 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 RPL30P62888 115 aaKnown RBP4.42□□□□□ -1.7
VPS13B-211ENST00000522802 HAMPP81172 84 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 ARFRP1Q13795 201 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 CCDC58Q4VC31 144 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 HSP90B2PQ58FF3 399 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 LIPKQ5VXJ0 399 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 MEDAGQ5VYS4 303 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 KCTD9Q7L273 389 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 STHQ8IWL8 128 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 PUSL1Q8N0Z8 303 aaKnown RBP4.42□□□□□ -1.7
VPS13B-211ENST00000522802 NKAIN3Q8N8D7 197 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 TRUB1Q8WWH5 349 aaKnown RBP4.42□□□□□ -1.7
VPS13B-211ENST00000522802 MAFIPQ8WZ33 124 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 BSCL2Q96G97 398 aaPredicted RBP4.42□□□□□ -1.7
VPS13B-211ENST00000522802 ADTRPQ96IZ2 230 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 DERL3Q96Q80 235 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 SLC29A1Q99808 456 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 UQCC2Q9BRT2 126 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 DCUN1D5Q9BTE7 237 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 CABLES2Q9BTV7 478 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 OR51E2Q9H255 320 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 MS4A6AQ9H2W1 248 aa4.42□□□□□ -1.7
VPS13B-211ENST00000522802 TRBV6-7A0A0A0MS04 114 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 IGHV3-66A0A0C4DH42 116 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 PNMA8CA0A1B0GUJ8 204 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 PTGES3LE9PB15 166 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 K7EMT4 169 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 OGG1O15527 345 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 FABP7O15540 132 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 APOHP02749 345 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-211ENST00000522802 SMR3BP02814 79 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-211ENST00000522802 HLA-GP17693 338 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 ANXA7P20073 488 aaKnown RBP4.41□□□□□ -1.7
VPS13B-211ENST00000522802 CRHBPP24387 322 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 NPY1RP25929 384 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 SERPINB10P48595 397 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 CAMPP49913 170 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 CMC4P56277 68 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-211ENST00000522802 OR2B8PP59922 312 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 RPL8P62917 257 aaKnown RBP4.41□□□□□ -1.7
VPS13B-211ENST00000522802 QRFPP83859 136 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 PLA2G7Q13093 441 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 TPBGQ13641 420 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 INSL4Q14641 139 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 TMEM41BQ5BJD5 291 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 YIF1BQ5BJH7 314 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 TCF24Q7RTU0 167 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 CDH26Q8IXH8 852 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 UBAC2Q8NBM4 344 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 OR4A4PQ8NGN8 299 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 OR10J5Q8NHC4 309 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 ARHGAP5-AS1Q96IT6 56 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 FAM210BQ96KR6 192 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 MYCBPQ99417 103 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-211ENST00000522802 LPAR5Q9H1C0 372 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 RIMS4Q9H426 269 aaPredicted RBP4.41□□□□□ -1.7
VPS13B-211ENST00000522802 RNF167Q9H6Y7 350 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 ZNF446Q9NWS9 450 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 GHRLQ9UBU3 117 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 MGAT4AQ9UM21 535 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 POMPQ9Y244 141 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 ARL2BPQ9Y2Y0 163 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 OR2W1Q9Y3N9 320 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 TMED3Q9Y3Q3 217 aa4.41□□□□□ -1.7
VPS13B-211ENST00000522802 A0A1W2PS18 150 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 IFITM10A6NMD0 228 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 SNTNA6NMZ2 147 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 TMEM14DPA8MWL7 114 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 J3QRK9 145 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 BUB3O43684 328 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 DFFBO76075 338 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 FCGR3AP08637 254 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 ZNF688P0C7X2 276 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 UBBP0CG47 229 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 SPART-AS1P0CW21 52 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 CALB2P22676 271 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 MAS1LP35410 378 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 DLK1P80370 383 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 TIMM50Q3ZCQ8 353 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 ACTL10Q5JWF8 245 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 FAM222AQ5U5X8 452 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 MZT2BQ6NZ67 158 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 LRRTM1Q86UE6 522 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 H1FOOQ8IZA3 346 aaPredicted RBP4.4□□□□□ -1.71
VPS13B-211ENST00000522802 GDPD1Q8N9F7 314 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 OR10W1Q8NGF6 305 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 OR4S2Q8NH73 311 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 VN1R17PQ8TDU5 208 aa4.4□□□□□ -1.71
VPS13B-211ENST00000522802 SECTM1Q8WVN6 248 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms