RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	ACY3	Q96HD9	319 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	TUBA4B	Q9H853	241 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	UBR5	O95071	2799 aa	Predicted RBP	13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	VPS13C	Q709C8	3753 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	ACTL6B	O94805	426 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	VENTX	O95231	258 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	SSBP2	P81877	361 aa	Predicted RBP	13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	TMEM249	Q2WGJ8	235 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	SPNS3	Q6ZMD2	512 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	C19orf35	Q6ZS72	473 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	VMO1	Q7Z5L0	202 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	CACNG8	Q8WXS5	425 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	HIST1H2BA	Q96A08	127 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	OVOL3	O00110	214 aa		13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	CRYBA1	P05813	215 aa		13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	AREG	P15514	252 aa		13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	GPX4	P36969	197 aa	Predicted RBP	13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	COMP	P49747	757 aa	Predicted RBP	13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	ZNF674	Q2M3X9	581 aa		13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	RPUSD4	Q96CM3	377 aa	Known RBP	13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	SLC35E1	Q96K37	410 aa		13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	BPESC1	Q9GZL8	116 aa		13.33	□□□□□ -0.28
FAM49B-223	ENST00000522746	C11orf94	C9JXX5	98 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	FCN1	O00602	326 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	CD24	P25063	80 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	SUB1	P53999	127 aa	Known RBP eCLIP	13.32	□□□□□ -0.28	2e-6	■■■■□ 24.6
FAM49B-223	ENST00000522746	CFHR4	Q92496	578 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	LRRK2	Q5S007	2527 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	TMEM250	H0YL14	139 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	OR2C1	O95371	312 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	CXorf1	O96002	111 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	ATP5G3	P48201	142 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	MFAP2	P55001	183 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	RHOB	P62745	196 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	FBLN7	Q53RD9	439 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	FAM24B	Q8N5W8	94 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	SMIM7	Q9BQ49	75 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	SDF2L1	Q9HCN8	221 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	MRPL36	Q9P0J6	103 aa	Known RBP	13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	FAM208B	Q5VWN6	2430 aa		13.32	□□□□□ -0.28
FAM49B-223	ENST00000522746	FOXH1	O75593	365 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	MAS1L	P35410	378 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	CEACAM3	P40198	252 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	PAX2	Q02962	417 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	KIAA0141	Q14154	515 aa	Predicted RBP	13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	FAM78B	Q5VT40	261 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	C1orf122	Q6ZSJ8	110 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	MIR17HG	Q75NE6	70 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	KIR3DL3	Q8N743	410 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	PARL	Q9H300	379 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	MLX	Q9UH92	298 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	SVEP1	Q4LDE5	3571 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746		A1L4Q6	167 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	IGHV4-39	P01824	125 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	HOXB4	P17483	251 aa	Predicted RBP	13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	PLGLA	Q15195	96 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	CST9LP1	Q5W188	147 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	RUSC1-AS1	Q66K80	236 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	NPIPB3	Q92617	1050 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	RNF5	Q99942	180 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746	SPG11	Q96JI7	2443 aa		13.31	□□□□□ -0.28
FAM49B-223	ENST00000522746		A0A087WWC5	75 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	TEX22	C9J3V5	150 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	NPPC	P23582	126 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	LGALS4	P56470	323 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	LMO4	P61968	165 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	MMD	Q15546	238 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	SSX2	Q16385	188 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	DYNAP	Q8N1N2	210 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	NRGN	Q92686	78 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	SIRPD	Q9H106	197 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	MT-ND4L	P03901	98 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	GCHFR	P30047	84 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	PNRC1	Q12796	327 aa	Predicted RBP	13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	HABP2	Q14520	560 aa	Predicted RBP	13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	OR51G1	Q8NGK1	321 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	MISP3	Q96FF7	219 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	YPEL4	Q96NS1	127 aa		13.3	□□□□□ -0.28
FAM49B-223	ENST00000522746	CYP2G1P	Q6ZSU1	146 aa		13.29	□□□□□ -0.28
FAM49B-223	ENST00000522746	ZNF114	Q8NC26	417 aa		13.29	□□□□□ -0.28
FAM49B-223	ENST00000522746	SRSF12	Q8WXF0	261 aa	Known RBP	13.29	□□□□□ -0.28
FAM49B-223	ENST00000522746	FUT9	Q9Y231	359 aa		13.29	□□□□□ -0.28
FAM49B-223	ENST00000522746	IGKV1D-37	A0A075B6S9	117 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	IGHV2-70D	A0A0C4DH43	119 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	PVRIG	Q6DKI7	326 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	ZNF343	Q6P1L6	599 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	MRPL41	Q8IXM3	137 aa	Known RBP	13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	NAT8	Q9UHE5	227 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	WNK2	Q9Y3S1	2297 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746		B4DEV8	164 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	NBR2	O15453	112 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	MOS	P00540	346 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	RND2	P52198	227 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	ZNF90	Q03938	601 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	TMEM241	Q24JQ0	296 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	ZFP82	Q8N141	532 aa		13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	EAF1	Q96JC9	268 aa	Predicted RBP	13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	YTHDF2	Q9Y5A9	579 aa	Known RBP	13.28	□□□□□ -0.28
FAM49B-223	ENST00000522746	IGHV3-21	A0A0B4J1V1	117 aa		13.27	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms