RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 NMSQ5H8A3 153 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 PLET1Q6UQ28 207 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 SCGB3A2Q96PL1 93 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 MRPL36Q9P0J6 103 aaKnown RBP13.51□□□□□ -0.25
CLK4-211ENST00000522556 PEMTQ9UBM1 199 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 FLVCR2Q9UPI3 526 aa13.51□□□□□ -0.25
CLK4-211ENST00000522556 A8MWP6 167 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 ERHP84090 104 aaKnown RBP13.5□□□□□ -0.25
CLK4-211ENST00000522556 CNPY1Q3B7I2 92 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 Q56UQ5 140 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 FAM219AQ8IW50 185 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 Q8N1Y9 231 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 ASCL2Q99929 193 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 B9D2Q9BPU9 175 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 PDCD10Q9BUL8 212 aa13.5□□□□□ -0.25
CLK4-211ENST00000522556 A6NHS1 94 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 INS-IGF2F8WCM5 200 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 CYB5BO43169 146 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 CBLN1P23435 193 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 VAMP1P23763 118 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 CD69Q07108 199 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 TMEM170AQ8WVE7 144 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 IL22RA2Q969J5 263 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 ZNF436Q9C0F3 470 aaPredicted RBP13.49□□□□□ -0.25
CLK4-211ENST00000522556 FNDC4Q9H6D8 234 aaPredicted RBP13.49□□□□□ -0.25
CLK4-211ENST00000522556 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.49□□□□□ -0.25
CLK4-211ENST00000522556 MLXQ9UH92 298 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 KCNIP3Q9Y2W7 256 aa13.49□□□□□ -0.25
CLK4-211ENST00000522556 A0A0B4J2A0 478 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 ZNF207O43670 478 aaKnown RBP13.48□□□□□ -0.25
CLK4-211ENST00000522556 CTSGP08311 255 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 INPP1P49441 399 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 SPCS3P61009 180 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 MLANAQ16655 118 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 DEFB114Q30KQ6 69 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 BSXQ3C1V8 233 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 TMEM128Q5BJH2 165 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 PVRIGQ6DKI7 326 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 OR1L6Q8NGR2 347 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 DYNLRB2Q8TF09 96 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 DEDD2Q8WXF8 326 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 TMEM190Q8WZ59 177 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 WDR89Q96FK6 387 aaPredicted RBP13.48□□□□□ -0.25
CLK4-211ENST00000522556 BSCL2Q96G97 398 aaPredicted RBP13.48□□□□□ -0.25
CLK4-211ENST00000522556 SLC25A21Q9BQT8 299 aaPredicted RBP13.48□□□□□ -0.25
CLK4-211ENST00000522556 SHPKQ9UHJ6 478 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 SMAD5-AS1Q9Y6J3 95 aa13.48□□□□□ -0.25
CLK4-211ENST00000522556 PLA2G10O15496 165 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 SULT1A3P0DMM9 295 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 SULT1A4P0DMN0 295 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 RBMS2Q15434 407 aaKnown RBP13.47□□□□□ -0.25
CLK4-211ENST00000522556 FAM106AQ4KMX7 169 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 BTNL8Q6UX41 500 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 LGI3Q8N145 548 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 CENPSQ8N2Z9 138 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 UXS1Q8NBZ7 420 aa13.47□□□□□ -0.25
CLK4-211ENST00000522556 ZNF785A8K8V0 405 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 NDUFB6O95139 128 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 SFT2D2O95562 160 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 SNCAP37840 140 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 LCN12Q6JVE5 192 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 TMEM61Q8N0U2 210 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 OR52E5Q8NH55 327 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 WFDC10AQ9H1F0 79 aa13.46□□□□□ -0.25
CLK4-211ENST00000522556 CEBPZOSA8MTT3 80 aa13.45□□□□□ -0.26
CLK4-211ENST00000522556 FRMD6-AS1P0C7T7 363 aa13.45□□□□□ -0.26
CLK4-211ENST00000522556 MFAP4P55083 255 aa13.45□□□□□ -0.26
CLK4-211ENST00000522556 SMCO1Q147U7 214 aa13.45□□□□□ -0.26
CLK4-211ENST00000522556 C20orf24Q9BUV8 137 aa13.45□□□□□ -0.26
CLK4-211ENST00000522556 ENY2Q9NPA8 101 aa13.45□□□□□ -0.26
CLK4-211ENST00000522556 NAP1L6A6NFF2 107 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 CD7P09564 240 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 IGHV4-30-4P0DP06 118 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 ANXA3P12429 323 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 ANXA7P20073 488 aaKnown RBP13.44□□□□□ -0.26
CLK4-211ENST00000522556 TNFRSF9Q07011 255 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 SPSB3Q6PJ21 355 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 SBSPONQ8IVN8 264 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 RBKSQ9H477 322 aa13.44□□□□□ -0.26
CLK4-211ENST00000522556 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
CLK4-211ENST00000522556 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 NDUFA4O00483 81 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 SCAF4O95104 1147 aaKnown RBP13.43□□□□□ -0.26
CLK4-211ENST00000522556 C8orf88P0DMB2 117 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 FCGR2BP31994 310 aaPredicted RBP13.43□□□□□ -0.26
CLK4-211ENST00000522556 OPRK1P41145 380 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 SRPXP78539 464 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 DCTN2Q13561 401 aaKnown RBP13.43□□□□□ -0.26
CLK4-211ENST00000522556 GUCA2BQ16661 112 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 LRTM2Q8N967 370 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 SLC24A4Q8NFF2 622 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 ATP6V0BQ99437 205 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 HSPB7Q9UBY9 170 aa13.43□□□□□ -0.26
CLK4-211ENST00000522556 C9orf170A2RU37 121 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 MPTX1A8MV57 137 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 NUPL2O15504 423 aaKnown RBP13.42□□□□□ -0.26
CLK4-211ENST00000522556 GNG7O60262 68 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 PITX3O75364 302 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 ADAP1O75689 374 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms