RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 OR5AC2Q9NZP5 309 aa18.79■□□□□ 0.6
PVT1-212ENST00000521951 FBXL7Q9UJT9 491 aa18.79■□□□□ 0.6
PVT1-212ENST00000521951 ATP5IP56385 69 aaPredicted RBP18.79■□□□□ 0.6
PVT1-212ENST00000521951 RPL23AP62750 156 aaKnown RBP18.79■□□□□ 0.6
PVT1-212ENST00000521951 RPP30P78346 268 aaKnown RBP18.79■□□□□ 0.6
PVT1-212ENST00000521951 NECAP1Q8NC96 275 aa18.79■□□□□ 0.6
PVT1-212ENST00000521951 MISP3Q96FF7 219 aa18.79■□□□□ 0.6
PVT1-212ENST00000521951 RNF126Q9BV68 326 aa18.79■□□□□ 0.6
PVT1-212ENST00000521951 STRAPQ9Y3F4 350 aaKnown RBP18.79■□□□□ 0.6
PVT1-212ENST00000521951 TENM1Q9UKZ4 2725 aa18.78■□□□□ 0.6
PVT1-212ENST00000521951 TSC22D2O75157 780 aa18.78■□□□□ 0.6
PVT1-212ENST00000521951 NOXA1Q86UR1 476 aa18.78■□□□□ 0.6
PVT1-212ENST00000521951 ZNF491Q8N8L2 437 aa18.78■□□□□ 0.6
PVT1-212ENST00000521951 MDFIQ99750 246 aa18.78■□□□□ 0.6
PVT1-212ENST00000521951 CITED2Q99967 270 aaPredicted RBP18.78■□□□□ 0.6
PVT1-212ENST00000521951 THYN1Q9P016 225 aa18.78■□□□□ 0.6
PVT1-212ENST00000521951 PAIP2BQ9ULR5 123 aaKnown RBP18.78■□□□□ 0.6
PVT1-212ENST00000521951 TRAV14DV4A0A0A6YYC5 116 aa18.77■□□□□ 0.6
PVT1-212ENST00000521951 TCRBV4S1A1TA0A5B7 111 aa18.77■□□□□ 0.6
PVT1-212ENST00000521951 FAM223BA6NKX1 122 aa18.77■□□□□ 0.6
PVT1-212ENST00000521951 Q5BKY6 102 aa18.77■□□□□ 0.6
PVT1-212ENST00000521951 PRSS54Q6PEW0 395 aa18.77■□□□□ 0.6
PVT1-212ENST00000521951 C12orf54Q6X4T0 127 aa18.77■□□□□ 0.6
PVT1-212ENST00000521951 FAM223AQ8IWN6 122 aa18.77■□□□□ 0.6
PVT1-212ENST00000521951 PET100P0DJ07 73 aa18.76■□□□□ 0.59
PVT1-212ENST00000521951 RAB11AP62491 216 aa18.76■□□□□ 0.59
PVT1-212ENST00000521951 C15orf32Q32M92 178 aa18.76■□□□□ 0.59
PVT1-212ENST00000521951 OR2T35Q8NGX2 323 aa18.76■□□□□ 0.59
PVT1-212ENST00000521951 USMG5Q96IX5 58 aa18.76■□□□□ 0.59
PVT1-212ENST00000521951 RANGRFQ9HD47 186 aaPredicted RBP18.76■□□□□ 0.59
PVT1-212ENST00000521951 E5RGE8 158 aa18.75■□□□□ 0.59
PVT1-212ENST00000521951 OR8U8P0C7N1 319 aa18.75■□□□□ 0.59
PVT1-212ENST00000521951 ATP5G2Q06055 141 aa18.75■□□□□ 0.59
PVT1-212ENST00000521951 TMEM14EPQ6UXP3 125 aa18.75■□□□□ 0.59
PVT1-212ENST00000521951 PINX1Q96BK5 328 aaKnown RBP18.75■□□□□ 0.59
PVT1-212ENST00000521951 MBD2Q9UBB5 411 aa18.75■□□□□ 0.59
PVT1-212ENST00000521951 IGHV3-21A0A0B4J1V1 117 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 A0A0G2JLM5 398 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 FAM24AA6NFZ4 105 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 I3L2K1 104 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 K7EIM0 57 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 CORTO00230 105 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 IFNA4P05014 189 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 FGL1Q08830 312 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 KHDC1LQ5JSQ8 128 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 THAP6Q8TBB0 222 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 RNASEH2CQ8TDP1 164 aaKnown RBP18.74■□□□□ 0.59
PVT1-212ENST00000521951 UBE2E2Q96LR5 201 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 CITED1Q99966 193 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 ZNF747Q9BV97 191 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 LYRM2Q9NU23 88 aaPredicted RBP18.74■□□□□ 0.59
PVT1-212ENST00000521951 CCNKO75909 580 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 MT-CO2P00403 227 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 LYL1P12980 280 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 CDX1P47902 265 aaPredicted RBP18.74■□□□□ 0.59
PVT1-212ENST00000521951 CAV2P51636 162 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 MLANAQ16655 118 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 ETV3LQ6ZN32 361 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 C3orf56Q8N813 242 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 ST6GAL2Q96JF0 529 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 FNDC4Q9H6D8 234 aaPredicted RBP18.74■□□□□ 0.59
PVT1-212ENST00000521951 TSSC4Q9Y5U2 329 aaPredicted RBP18.74■□□□□ 0.59
PVT1-212ENST00000521951 S4R3C0 116 aa18.74■□□□□ 0.59
PVT1-212ENST00000521951 MFSD2BA6NFX1 497 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 G3V3Q6 166 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 IGHV3-11P01762 117 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 METTL15P1P0C7V9 234 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 P2RY1P47900 373 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 EXOSC2Q13868 293 aaKnown RBP18.73■□□□□ 0.59
PVT1-212ENST00000521951 C18orf65Q6ZTR6 163 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 SCARB1Q8WTV0 552 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 GNB4Q9HAV0 340 aa18.73■□□□□ 0.59
PVT1-212ENST00000521951 PMS2P5A8MQ11 134 aa18.72■□□□□ 0.59
PVT1-212ENST00000521951 OPRK1P41145 380 aa18.72■□□□□ 0.59
PVT1-212ENST00000521951 VN1R17PQ8TDU5 208 aa18.72■□□□□ 0.59
PVT1-212ENST00000521951 CXorf58Q96LI9 332 aa18.72■□□□□ 0.59
PVT1-212ENST00000521951 IGSF23A1L1A6 192 aa18.71■□□□□ 0.59
PVT1-212ENST00000521951 SMLR1H3BR10 107 aa18.71■□□□□ 0.59
PVT1-212ENST00000521951 IGHV3-48P01763 117 aa18.71■□□□□ 0.59
PVT1-212ENST00000521951 IGHV3-23P01764 117 aa18.71■□□□□ 0.59
PVT1-212ENST00000521951 TMEM252Q8N6L7 170 aa18.71■□□□□ 0.59
PVT1-212ENST00000521951 DCUN1D4Q92564 292 aa18.71■□□□□ 0.59
PVT1-212ENST00000521951 OR5B12Q96R08 314 aa18.71■□□□□ 0.59
PVT1-212ENST00000521951 STAB1Q9NY15 2570 aa18.7■□□□□ 0.58
PVT1-212ENST00000521951 A0A1W2PRX2 142 aa18.7■□□□□ 0.58
PVT1-212ENST00000521951 ADARB2-AS1A8MUL3 147 aa18.7■□□□□ 0.58
PVT1-212ENST00000521951 PRSS46E5RG02 174 aa18.7■□□□□ 0.58
PVT1-212ENST00000521951 OR8G2PQ6IF36 304 aa18.7■□□□□ 0.58
PVT1-212ENST00000521951 EEF1AKMT3Q96AZ1 226 aa18.7■□□□□ 0.58
PVT1-212ENST00000521951 SLC25A4P12235 298 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 CD69Q07108 199 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 ZNF343Q6P1L6 599 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 AKAP14Q86UN6 197 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 HAPLN4Q86UW8 402 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 ZNF502Q8TBZ5 544 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 RPS10-NUDT3A0A1W2PQS6 291 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 CST7O76096 145 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 GPX4P36969 197 aaPredicted RBP18.69■□□□□ 0.58
PVT1-212ENST00000521951 ARL16Q0P5N6 197 aa18.69■□□□□ 0.58
PVT1-212ENST00000521951 NDUFA11Q86Y39 141 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms