RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 RAB11AP62491 216 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 TCTEX1D4Q5JR98 221 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 PRSS54Q6PEW0 395 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 LCNL1Q6ZST4 164 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 FAM223AQ8IWN6 122 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 NECAP1Q8NC96 275 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 MYOZ3Q8TDC0 251 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 OR5AC2Q9NZP5 309 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 FBXL7Q9UJT9 491 aa13.86□□□□□ -0.19
SDC2-205ENST00000520233 TRAV14DV4A0A0A6YYC5 116 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 H3BP45 60 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 NDUFB8O95169 186 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 CD28P10747 220 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 LYL1P12980 280 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 RHOGP84095 191 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 OR2T35Q8NGX2 323 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 THAP6Q8TBB0 222 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 RNASEH2CQ8TDP1 164 aaKnown RBP13.85□□□□□ -0.19
SDC2-205ENST00000520233 MISP3Q96FF7 219 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 USMG5Q96IX5 58 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 RANGRFQ9HD47 186 aaPredicted RBP13.85□□□□□ -0.19
SDC2-205ENST00000520233 JMJD1CQ15652 2540 aa13.85□□□□□ -0.19
SDC2-205ENST00000520233 A0A0G2JLM5 398 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 CCNKO75909 580 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 OR8U8P0C7N1 319 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 P2RY1P47900 373 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 KIAA0141Q14154 515 aaPredicted RBP13.84□□□□□ -0.19
SDC2-205ENST00000520233 Q5BKY6 102 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 TMEM14EPQ6UXP3 125 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 ZNF491Q8N8L2 437 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 ST6GAL2Q96JF0 529 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 LYRM2Q9NU23 88 aaPredicted RBP13.84□□□□□ -0.19
SDC2-205ENST00000520233 MBD2Q9UBB5 411 aa13.84□□□□□ -0.19
SDC2-205ENST00000520233 PAIP2BQ9ULR5 123 aaKnown RBP13.84□□□□□ -0.19
SDC2-205ENST00000520233 TCRBV4S1A1TA0A5B7 111 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 FAM24AA6NFZ4 105 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 IFNA4P05014 189 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 CAV2P51636 162 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 DEFA5Q01523 94 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 EXOSC2Q13868 293 aaKnown RBP13.83□□□□□ -0.2
SDC2-205ENST00000520233 ETV3LQ6ZN32 361 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 AKAP14Q86UN6 197 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 C11orf44Q8N8P7 122 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 UBE2E2Q96LR5 201 aa13.83□□□□□ -0.2
SDC2-205ENST00000520233 I3L2K1 104 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 K7EIM0 57 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 MT-CO2P00403 227 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 SLC25A4P12235 298 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 CDX1P47902 265 aaPredicted RBP13.82□□□□□ -0.2
SDC2-205ENST00000520233 C15orf32Q32M92 178 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 C12orf54Q6X4T0 127 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 VN1R17PQ8TDU5 208 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 PINX1Q96BK5 328 aaKnown RBP13.82□□□□□ -0.2
SDC2-205ENST00000520233 CXorf58Q96LI9 332 aa13.82□□□□□ -0.2
SDC2-205ENST00000520233 CITED2Q99967 270 aaPredicted RBP13.82□□□□□ -0.2
SDC2-205ENST00000520233 TSSC4Q9Y5U2 329 aaPredicted RBP13.82□□□□□ -0.2
SDC2-205ENST00000520233 RPS10-NUDT3A0A1W2PQS6 291 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 PMS2P5A8MQ11 134 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 G3V3Q6 166 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 SCAF4O95104 1147 aaKnown RBP13.81□□□□□ -0.2
SDC2-205ENST00000520233 METTL15P1P0C7V9 234 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 OPRK1P41145 380 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 ETFRF1Q6IPR1 90 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 TCTE3Q8IZS6 198 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 TMEM252Q8N6L7 170 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 DCUN1D4Q92564 292 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 CITED1Q99966 193 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 ZNF747Q9BV97 191 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 SLC25A31Q9H0C2 315 aa13.81□□□□□ -0.2
SDC2-205ENST00000520233 FNDC4Q9H6D8 234 aaPredicted RBP13.81□□□□□ -0.2
SDC2-205ENST00000520233 IGSF23A1L1A6 192 aa13.8□□□□□ -0.2
SDC2-205ENST00000520233 PRSS46E5RG02 174 aa13.8□□□□□ -0.2
SDC2-205ENST00000520233 SULT1A1P50225 295 aa13.8□□□□□ -0.2
SDC2-205ENST00000520233 CD69Q07108 199 aa13.8□□□□□ -0.2
SDC2-205ENST00000520233 KHDC1LQ5JSQ8 128 aa13.8□□□□□ -0.2
SDC2-205ENST00000520233 SCARB1Q8WTV0 552 aa13.8□□□□□ -0.2
SDC2-205ENST00000520233 EEF1AKMT3Q96AZ1 226 aa13.8□□□□□ -0.2
SDC2-205ENST00000520233 TRBV7-1A0A0A6YYK4 115 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 MFSD2BA6NFX1 497 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 SMLR1H3BR10 107 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 IGHV3-11P01762 117 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 GPX4P36969 197 aaPredicted RBP13.79□□□□□ -0.2
SDC2-205ENST00000520233 MLANAQ16655 118 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 FAM209BQ5JX69 171 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 HIST2H2BDQ6DRA6 164 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 OR8G2PQ6IF36 304 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 ZNF343Q6P1L6 599 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 NDUFA11Q86Y39 141 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 STX12Q86Y82 276 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 OR10P1Q8NGE3 313 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 ZNF502Q8TBZ5 544 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 C4orf3Q8WVX3 66 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 CACNG8Q8WXS5 425 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 GNB4Q9HAV0 340 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 C21orf62Q9NYP8 219 aa13.79□□□□□ -0.2
SDC2-205ENST00000520233 FXYD6-FXYD2A0A087WZ82 144 aa13.78□□□□□ -0.2
SDC2-205ENST00000520233 LGALS1P09382 135 aaKnown RBP13.78□□□□□ -0.2
SDC2-205ENST00000520233 RPL12P30050 165 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms