RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 H1FXQ92522 213 aaKnown RBP2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 DGCR14Q96DF8 476 aaKnown RBP2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 KIFC1Q9BW19 673 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 CCDC90BQ9GZT6 254 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 C14orf105Q9NVL8 296 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 TP73-AS1Q9UF72 201 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 WDR90Q96KV7 1748 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 MYO9BQ13459 2157 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 PXDNLA1KZ92 1463 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 TAF1LQ8IZX4 1826 aa2.24□□□□□ -2.05
HMGB1P46-201ENST00000520062 SCN9AQ15858 1988 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 DENND4BO75064 1496 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 NEO1Q92859 1461 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 SCAF11Q99590 1463 aaKnown RBP2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 EFCAB10A6NFE3 127 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 H0YJX3 145 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 G6PCP35575 357 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 NDUFA5Q16718 116 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 LRRC28Q86X40 367 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 RNASE7Q9H1E1 156 aaKnown RBP2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 BATF3Q9NR55 127 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 STOML2Q9UJZ1 356 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 ARL5AQ9Y689 179 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 RTL1A6NKG5 1358 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 KIF24Q5T7B8 1368 aa2.23□□□□□ -2.05
HMGB1P46-201ENST00000520062 PRDM2Q13029 1718 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 MYH10P35580 1976 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 A0A1B0GVG6 124 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 ZNF682O95780 498 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 FABP1P07148 127 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 DEFA4P12838 97 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 RPS4Y1P22090 263 aaKnown RBP2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 CCDC58Q4VC31 144 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 FAM27BQ5VT28 67 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 C3orf33Q6P1S2 294 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 TAC4Q86UU9 113 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 SPACA4Q8TDM5 124 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 C11orf40Q8WZ69 217 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 UQCC1Q9NVA1 299 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 ARHGAP32A7KAX9 2087 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 VWDEQ8N2E2 1590 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 HECW2Q9P2P5 1572 aa2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 ROCK2O75116 1388 aaKnown RBP2.22□□□□□ -2.05
HMGB1P46-201ENST00000520062 MEIS3P1A6NDR6 274 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 ZNF860A6NHJ4 632 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 TRAPPC2LH3BP13 241 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 PGLYRP1O75594 196 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 C1QCP02747 245 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 C8GP07360 202 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 PPIBP23284 216 aaKnown RBP2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 GNG10P50151 68 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 DEFA1P59665 94 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 SLC38A11Q08AI6 406 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 RALGAPA2Q2PPJ7 1873 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 SMIM15Q7Z3B0 74 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 OR10X1Q8NGY0 326 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 C2orf50Q96LR7 162 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 SCGB3A1Q96QR1 104 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 PRRT1Q99946 306 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 KRTAP4-3Q9BYR4 195 aa2.21□□□□□ -2.06
HMGB1P46-201ENST00000520062 PCF11O94913 1555 aaKnown RBP2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 hCG_1818297A0A087WSY0 165 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 GNG14A0A1W2PPG7 69 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 FUOMA2VDF0 154 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 FAM159BA6NKW6 160 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 A8MT66 165 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 DHFRP00374 187 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 METTL15P1P0C7V9 234 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 SUPT4H1P63272 117 aaKnown RBP2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 KISS1Q15726 138 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 PCOTHQ58A44 107 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 TERB2Q8NHR7 220 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 TMEM106AQ96A25 262 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 RMND5BQ96G75 393 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 HSPB9Q9BQS6 159 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 RNF122Q9H9V4 155 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 ERGIC3Q9Y282 383 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 DISP1Q96F81 1524 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 CPDO75976 1380 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 PLXNA3P51805 1871 aa2.2□□□□□ -2.06
HMGB1P46-201ENST00000520062 CCDC171Q6TFL3 1326 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 PTPRGP23470 1445 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 STRCP1A6NGW2 1772 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 MEIKINA0A087WXM9 373 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 C19orf84I3L1E1 186 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 TRGC1P0CF51 173 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 IFI30P13284 250 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 MAGEA12P43365 314 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 SLC36A1Q7Z2H8 476 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 PXT1Q8NFP0 134 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 OR11H6Q8NGC7 330 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 PFN4Q8NHR9 129 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 GNPDA2Q8TDQ7 276 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 FAM172AQ8WUF8 416 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 AP3S1Q92572 193 aa2.19□□□□□ -2.06
HMGB1P46-201ENST00000520062 PBRM1Q86U86 1689 aa2.18□□□□□ -2.06
HMGB1P46-201ENST00000520062 TMEM238C9JI98 176 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms